Phascolarctos cinereus (koala): 110218199
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Entry
110218199 CDS
T05867
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
pcw05202
Transcriptional misregulation in cancer
pcw05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110218199 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110218199 (DDX5)
05205 Proteoglycans in cancer
110218199 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110218199 (DDX5)
03009 Ribosome biogenesis [BR:
pcw03009
]
110218199 (DDX5)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110218199 (DDX5)
Spliceosome [BR:
pcw03041
]
Complex A
U1 snRNP components
U1 related factors
110218199 (DDX5)
Complex B
110218199 (DDX5)
Ribosome biogenesis [BR:
pcw03009
]
Eukaryotic type
Pre-60S particles
Helicases
110218199 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
110218199
NCBI-ProteinID:
XP_020856427
UniProt:
A0A6P5LED5
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLIKKKWNLEELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPILNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLIEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAASY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGNNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatactcgagtgacagagaccgcggccgggatcgagggtttggggcccctagg
tttggaggaagtaggggaggacctctatccggaaagaagtttggaaaccctggggagaaa
ctcattaaaaagaaatggaatctcgaggaactgcccaaatttgagaagaatttttatcag
gaacatcctgatttggctaggcgcacagcacaagaggttgatacttatcgaagaagcaaa
gaaattacagtacgaggtcacaactgcccaaaaccaattctaaatttttacgaagcaaat
tttcctgcaaatgtcatggatgtgattgcaaggcagaacttcactgaacctactgctatc
caagcccaaggttggcctgttgctctaagtgggttggatatggttggagtagcacagact
ggatcagggaaaacactgtcttatttgctgcctgccattgtccacataaatcatcagcca
ttcctagagagaggtgatgggcctatttgtttggtgctggcgccaactcgtgaactggcc
caacaggtacaacaagtagctgccgagtacagtagagcatgtcgtctaaagtccacttgc
atctatggtggtgctccaaagggaccacagatacgggacttggaaagaggtgtagaaatt
tgcattgcaacacctggaagactgatagactttttagagtgtgggaaaactaatctgaga
agaacaacttaccttgtgcttgatgaagcagacagaatgcttgatatgggcttcgagcct
cagatcaggaagattgttgatcagataagacctgacagacaaaccctaatgtggagtgca
acttggccaaaagaagtgaggcagcttgcagaagactttttgaaagattacattcacatc
aacattggtgctctggaactgagtgcaaatcacaatattcttcagattgtggatgtgtgt
catgatgtagaaaaggatgagaaacttattcgattgatggaggagatcatgagcgaaaag
gaaaataaaactattgtttttgtggaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgcaatgggtattcatggtgacaagagtcaacaggagcga
gactgggttctaaatgaattcaaacatggaaaagctcctatcctgattgccacagatgtt
gcatctagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcttcagaagattatatccaccgaattggacgaactgcccgtagtaccaaaacaggcaca
gcatatactttctttacgcctaataacataaaacaagtaagcgacctcatctctgtgctt
cgggaggctaatcaagcaatcaatcccaaattgcttcagttaattgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgatcgccgtgacagatactctgcgggc
aaaaggggtggatttaatacctttagggacagggaaaattatgacagaggttattctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtctacagtgctgcaagttac
accaatgggagctttggaagtaattttgtgtctgctggtatacagactagttttaggact
ggtaatccaacagggacttaccagaatggttatgacagtacacagcaatatggaaataat
gtcccaaatatgcacaatggcatgaaccaacaggcatatgcatatcctgctactgcagct
gcacctatgataggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
