Phascolarctos cinereus (koala): 110218276
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Entry
110218276 CDS
T05867
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03015
mRNA surveillance pathway
pcw03040
Spliceosome
pcw05014
Amyotrophic lateral sclerosis
pcw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110218276 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
110218276 (ALYREF)
03015 mRNA surveillance pathway
110218276 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110218276 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110218276 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110218276 (ALYREF)
03041 Spliceosome [BR:
pcw03041
]
110218276 (ALYREF)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110218276 (ALYREF)
TREX complex
110218276 (ALYREF)
Spliceosome [BR:
pcw03041
]
Complex C
Other components
EJC/TREX
110218276 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110218276 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FYTT
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110218276
NCBI-ProteinID:
XP_020856549
UniProt:
A0A6P5LIX1
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGAQGGRGGGGAQAAARVSRGGGPIRNRP
AMARGGAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSD
ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQ
LVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGSTRRGTRGAIEDEAEGLEEIRNNSFP
QKN
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaaactcaaccggagccagcgg
ggcggacgcggcgggggccggggccgaggccgggccggggcccagggcggccgcggcggc
gggggcgcgcaggcggcagcccgcgtgagccggggcggggggcccatccggaataggccg
gccatggcccgcggaggcgccgggggcggcggcaggaaccgacccgcgccctacagccga
ccaaaacagcttccagataagtggcaacacgacctgttcgacagcggctttggaggcggg
gctggcgtcgagaccggtggcaaattgctggtctccaatctggattttggggtctcagat
gcggatattcaggaactatttgctgaatttggaactctgaaaaaggcagctgtacattac
gatcggtctggccggagcttaggaacagcagatgttcactttgagcgaaaagcagatgct
ctgaaggccatgaaacagtataatggtgtccctttggatggtcgccctatgaatattcag
cttgttacatcacagattgatacacaacgaagacctgcacagagtgtaaatagaggtgga
atgactagaaaccgtggctctgggggttttggtggtggaggcagcacccggagaggcact
cgtggagcaatagaggacgaggcagagggactggaagaaattcgaaacaacagctttccg
cagaagaactag
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integrated database retrieval system