KEGG   Phascolarctos cinereus (koala): 110218276
Entry
110218276         CDS       T05867                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03013  Nucleocytoplasmic transport
pcw03015  mRNA surveillance pathway
pcw03040  Spliceosome
pcw05014  Amyotrophic lateral sclerosis
pcw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110218276 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    110218276 (ALYREF)
   03015 mRNA surveillance pathway
    110218276 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110218276 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110218276 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110218276 (ALYREF)
   03041 Spliceosome [BR:pcw03041]
    110218276 (ALYREF)
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110218276 (ALYREF)
    TREX complex
     110218276 (ALYREF)
Spliceosome [BR:pcw03041]
 Complex C
  Other components
   EJC/TREX
    110218276 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110218276 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FYTT RRM_occluded
Other DBs
NCBI-GeneID: 110218276
NCBI-ProteinID: XP_020856549
UniProt: A0A6P5LIX1
LinkDB
Position
Unknown
AA seq 243 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGAQGGRGGGGAQAAARVSRGGGPIRNRP
AMARGGAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSD
ADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQ
LVTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGSTRRGTRGAIEDEAEGLEEIRNNSFP
QKN
NT seq 732 nt   +upstreamnt  +downstreamnt
atggccgacaagatggacatgtccctggacgacatcattaaactcaaccggagccagcgg
ggcggacgcggcgggggccggggccgaggccgggccggggcccagggcggccgcggcggc
gggggcgcgcaggcggcagcccgcgtgagccggggcggggggcccatccggaataggccg
gccatggcccgcggaggcgccgggggcggcggcaggaaccgacccgcgccctacagccga
ccaaaacagcttccagataagtggcaacacgacctgttcgacagcggctttggaggcggg
gctggcgtcgagaccggtggcaaattgctggtctccaatctggattttggggtctcagat
gcggatattcaggaactatttgctgaatttggaactctgaaaaaggcagctgtacattac
gatcggtctggccggagcttaggaacagcagatgttcactttgagcgaaaagcagatgct
ctgaaggccatgaaacagtataatggtgtccctttggatggtcgccctatgaatattcag
cttgttacatcacagattgatacacaacgaagacctgcacagagtgtaaatagaggtgga
atgactagaaaccgtggctctgggggttttggtggtggaggcagcacccggagaggcact
cgtggagcaatagaggacgaggcagagggactggaagaaattcgaaacaacagctttccg
cagaagaactag

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