Phascolarctos cinereus (koala): 110218513
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Entry
110218513 CDS
T05867
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw01524
Platinum drug resistance
pcw03430
Mismatch repair
pcw05200
Pathways in cancer
pcw05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110218513 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110218513 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
110218513 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
110218513 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110218513 (MSH2)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110218513 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
GrpE
Motif
Other DBs
NCBI-GeneID:
110218513
NCBI-ProteinID:
XP_020856925
UniProt:
A0A6P5LEZ2
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All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MALQPKEVLAMDSQAECSFIRFFQAMPPKPLTTVRIFDRGDYYTAHGDDALLAAREVFKT
QAVIKYIGVTGTKKLESVVLSKMNFESFAKDLLLVRQYRVEVYKNKAGNKATKENDWHVA
FKASPGNLSQFEEVLFGSSDMSCSIGGVGVKLSVVDGQRLVGVGYVDSIQRKLGLCEFPD
NDQFSNLQALLIQIGPKECVLPGGETAGDMGKLRQVIERGGILITERKKADFAAKDIVQD
LNRLLKSRKGDQVNSAVLPEMENQVAISSLSAVIKYLELLSDDTNFGQFELTTFDLNQYM
KLDNAAVGALNLFQGSAEDKSGTQSLAALLNKCKTPQGQRLLNQWIKQPLLDKNWIEERL
NLVEVFVVDAELRQSLQEDLLRRFPDLNRFAKKFQRHAASLQDCYRIYQAINHLPNVIQA
LEKHEGTHQSLLLAVFITPLTDLHSDFSKFQEMIETTLDMNQVENHEFLVKASFDPHLME
LRESITNLEKKMQASLTNAARELGLEAGKHIKLDSNAQLGYYFRVTCKEEKVLRSNKNFN
TLDVQKNGVKFTNSKLAAYNDEYLKIREEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGKIILKGSRHACVEVQDEVAFIPNDIYFEKN
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSIVDCILARVGAGDCQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALADQLPTVNNLHVSALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IENAKQKALELEEFQHFGKPQESDETEPAAKRCYGEREQGEKIIETFLAKVKELPFAGMS
EEGIRIKLKQLKAEVVSQNNSFVNEIISRLKVTP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaaccgaaggaggtgctggccatggacagccaggccgagtgcagtttcatc
cgcttcttccaggccatgccgccgaagccgctcaccaccgtacgcatcttcgaccggggc
gattactacaccgcgcacggcgatgacgcgctgttggccgcccgggaggtgttcaagacc
caggcggtcatcaagtatatcggggtaaccggtacaaaaaaattggaaagtgttgtgctt
agtaaaatgaattttgaatcttttgcgaaagacctcctcttggttcgtcagtatagagtt
gaagtttataagaataaagctgggaataaggccaccaaggagaatgattggcatgtggca
ttcaaggcttcaccaggcaatctttcccaatttgaagaagttctctttggcagtagtgat
atgtcatgttccattggtggtgtaggtgttaagttgtctgttgttgatggccaaagatta
gttggggttgggtatgttgactccatacagaggaagctaggactgtgtgagtttccagat
aatgaccagttctccaatctccaagctctgctgattcagattggcccaaaggaatgtgtg
ctaccaggaggtgaaactgctggggacatgggaaaactgagacaggttattgagagagga
ggaattctgatcacagagagaaagaaagctgactttgcagcaaaagatattgttcaggac
ctcaaccgtttgttgaaaagcagaaagggagaccaagtgaatagtgctgtattgcccgag
atggagaaccaggtcgcaatttcatcattatcagctgtgattaagtatttagaactttta
tcagatgatacaaactttggacaatttgaactgactacctttgacctcaaccagtatatg
aagctggataatgcagctgtcggagctcttaacctttttcagggctctgctgaagacaaa
agtggtactcagtctcttgctgcactgctgaataagtgcaaaacccctcaaggccaaaga
ctgcttaatcaatggattaagcagccactactggataagaactggatagaggaaagatta
aatttagtggaggtctttgtagtagatgcagagctgagacagagtttacaagaagaccta
cttcgtcgtttcccagatcttaaccgatttgccaaaaagtttcagaggcatgcagccagt
ttacaagattgttatagaatctatcaagccataaaccatcttcctaatgttatacaagca
ctggaaaaacacgaaggaacacaccaatcactgttattggcagtcttcataactcctttg
actgatctacattctgatttctccaagtttcaggaaatgatagaaacaaccttagatatg
aatcaggtggaaaaccatgaatttcttgtgaaggcatcctttgatcctcacctgatggag
ttaagagagtcaattactaatctagaaaagaagatgcaggcatctttaacaaatgcagca
agagagctaggcttagaagctggtaaacacattaaactggactccaatgcacagttggga
tattactttcgcgtaacctgcaaggaagaaaaagtccttcgtagcaataaaaactttaac
acattagatgtccagaagaatggtgttaagtttaccaacagcaaattggctgcctacaat
gatgagtacctcaaaattagagaagagtatgaggaagcccaggatgccattgttaaagaa
attgtcaacatttcttctggctatgtagaaccaatgcagacactgaatgatgtattagct
caactagatgcagttgtcagttttgctcatgtatcaaatggtgcacctgttccatatgta
cgtcccgtcattttggaaaagggacaaggaaaaatcattttgaaaggttccagacatgct
tgtgttgaagttcaagatgaagttgcgtttattcccaatgacatttactttgagaaaaat
aagcagatgttccacattattactggccctaatatgggaggtaaatcaacatacattcgt
caaactggagtaatagttctgatggctcaaatcggctgttttgtgccatgtgactcagca
gaagtgtccattgtggactgtatcttggctcgagttggagcaggggattgtcagctgaaa
ggtgtgtctacgttcatggcagaaatgctagagacggcttctattctcaggtctgcaacc
aaagattccctgataatcatcgatgagctgggaagaggaacttctacctatgatggattt
gggttagcatgggctatttcggagtatattgccactaagataggtgccttctgtatgttt
gctactcattttcatgaactgacagcattggctgaccagttgccaacagtgaataatctg
cacgtttcagcattaactactgatgagacgttaactatgctatatcaagtgaagaaaggt
gtctgtgatcagagttttgggattcatgttgcagagcttgctaattttcctaagcatgtg
atagagaatgccaaacagaaggctctggaactagaggaattccagcattttgggaagcct
caagaatctgatgaaacagaaccagcagccaagagatgctacggcgagagagagcaaggt
gaaaaaataattgagacatttctggccaaggtaaaggaattgccttttgcaggaatgtct
gaggaaggcatcagaatcaaattaaaacaactgaaggctgaagtggtatcacaaaataac
agttttgtgaatgaaataatctcacggttaaaagttactccatga
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