Phascolarctos cinereus (koala): 110218883
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Entry
110218883 CDS
T05867
Symbol
SMARCA2
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03082
ATP-dependent chromatin remodeling
pcw04714
Thermogenesis
pcw05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110218883 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110218883 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110218883 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110218883 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110218883 (SMARCA2)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110218883 (SMARCA2)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110218883 (SMARCA2)
Chromatin remodeling factors
BAF complex
110218883 (SMARCA2)
PBAF complex
110218883 (SMARCA2)
GBAF(ncBAF) complex
110218883 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
110218883
NCBI-ProteinID:
XP_020857522
UniProt:
A0A6P5LHB7
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHSMPTM
GPTDFPQEGMHQMHKSIDGMHDKGIVEDLHCSSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPMIAGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPSIQQQQPPLVTFNRPSGIGMHPIGTPP
AGPGQTSGIPGHTSTMTPKTWAEGQAPDMNVPSTPQKLAVPPPSGRPSPAPPAAQPAAAL
PGPSVPQPTPGQPSPVVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE
NLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQT
LREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVAT
WHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTN
LVWEHKQAQAAKEKKKKRRRKKKEQENAEGMESGLGPDGEPIDESSQMSDLPVKVTHTET
GKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSEYEEEDDEEELSRQETEEKILL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLING
TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPXQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQFFIFLLSTRAGGLGLNLQAADTVV
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVEKEPGKEDVEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDEE
EEEDEDESESEAKSVKVKIKLNKKDEKGRDKGKGKKRQSRGKAKPVVSDYDSDEEQDEND
QSEASGTDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagatcctggtgcaatgccccaccctggaccttcaccagggccagga
ccctcccctggaccaattcttggacccagtccagggccagggccatctccaggttcagtg
cacagcatgatgggaccaagtcctggaccacccagtgttccacattcaatgccaacaatg
gggcccactgattttccacaggaaggaatgcaccaaatgcacaagtccattgatggtatg
cacgacaaaggcattgttgaagatctacattgtagctccatgaagggcacgggcatgcga
ccaccacatcctggaatgggcccacctcagagtccaatggatcaacatagccaaggttat
atgtctccacacccgtctccactgggagccccagaacatgtctccagcccaatgtctgga
gggggtccaactccgccccagatgcctccaagccagccaggacccatgatagcaggagat
cctcaggctatgagccaacccaaccgaggcccttcacctttcagccccgtccagctgcat
cagctccgagctcaaattttagcttacaaaatgttggccagaggccagccactacccgaa
acattgcagctagctgtgcaggggaagaggacgctgcctagcatacagcaacaacaacca
cctcttgtcaccttcaaccgaccatctggcatagggatgcatccaattggcacacctcca
gctgggccaggacagacatcagggattccagggcacacatctacaatgactcctaaaaca
tgggcagaaggccaagcaccagacatgaatgttccaagtaccccacaaaagcttgcagtt
ccacctccaagtggaaggccttcaccagcccctccagctgctcagccggctgctgccctg
cctggaccttctgtgccccagccaacccctgggcaaccttcacccgtggttcagctgcag
caaaagcagaatcggattagccctattcagaaaccacagggactggatcctgttgaaata
ctgcaggagagagaatacagacttcaggctcgtatagctcacagaatccaagaactggaa
aatttgccaggctctttgccaccagatttacgaaccaaggctacggtggaactgaaggct
cttaggttactgaattttcaacggcagttaagacaagaagtggtagcctgtatgcgtcga
gacacaaccttagagactgccctgaactccaaagcctacaaacgcagcaagaggcaaaca
ctgagggaagcccgaatgacagaaaagcttgagaaacaacagaagattgaacaggagagg
aagcgcagacagaagcaccaggaatacctgaacagcattttgcaacacgcaaaagatttt
aaagagtaccaccggtcagtggctgggaaaattcagaaactttctaaagcagtggcaact
tggcatgctaacactgaacgagagcagaaaaaagaaacagaacgcatcgaaaaggaaaga
atgaggaggctgatggctgaagatgaagaaggctaccgaaaactgatcgatcagaagaaa
gataggcgcttagcttaccttttacagcagactgacgagtacgtggccaacctgactaac
ctggtatgggagcacaaacaagcacaagctgccaaagaaaagaaaaagaaaaggcggagg
aagaagaaggaacaagagaatgctgagggaatggaatctggcctgggaccagatggggag
ccaatagatgaaagcagtcagatgagtgatcttcctgtgaaagtgactcatacagaaact
ggcaaagttcttcttggtcctgaagctcctaaagcaagtcaactggatgcttggttagaa
atgaatcctggttatgaagtggcccctagatctgatagtgaggagagtgattctgaatat
gaggaggaggatgatgaagaggaattgagcaggcaggaaacagaggagaagatacttctt
gatccaaacagtgaagaagtttctgagaaggatgctaaacagatcattgagactgccaag
caagacgtggatgatgaatacagcatgcagtatagtgctagagggtcccagtcctactat
accgtagctcatgcaatatcagagagggtagagaagcagtctgctcttctcattaatggc
accctaaagcattatcagctccagggcctggaatggatggtttcactgtataataacaat
ctgaatggaattttagctgatgagatggggctaggaaagaccatacagacgatcgcactc
atcacttatctgatggagcacaagagactcaatggaccctatctcatcattgttcccctt
tcgactttatctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatc
tcttacaagggcactcccgctatgcgccgctcgcttgtcccccaacttcgtagtggaaaa
tttaatgtccttttaactacttatgagtacattataaaggataaacacatccttgctaag
atccggtggaagtacatgatagtagatgaaggccaccgaatgaagaatcatcactgcaag
ctgactcaggtcttgaatacccactatgtggcaccaagacgaatactcctgactgggacg
cccntgcagaacaagctgcccgaactctgggccctcctcaactttcttcttcccaccatt
tttaagagctgtagcacttttgagcagtggtttaatgccccctttgccatgactggagaa
agggtggacttaaatgaagaagaaactatattgattatcagacgtcttcataaagtgctg
cgaccgtttctgctgaggagactgaagaaggaagtggaatcccagctaccagaaaaggtt
gaatatgtgatcaaatgtgacatgtcagctctacagaaaatattgtaccgccatatgcaa
gcaaaggggattcttctcaccgacggttcagagaaagataagaagggcaaaggtggggct
aaaacgctgatgaacactatcatgcagttgagaaagatatgtaatcacccatacatgttt
caacacattgaggaatcctttgctgagcatctgggctactcaagtggggttatcaatgga
gctgaactctaccgagcctcggggaagtttgagctcctggaccgcatcctgccaaagctg
cgggccaccaatcaccgagtgctgctcttctgccagatgacgtccctcatgaccatcatg
gaggactactttgcttttcggaatttcctttacctacgccttgatggtaccacaaaatca
gaagatcgtgctgccttgctgaagaagttcaatgagcctggctcacaatttttcattttc
ttactaagtaccagagcaggaggcctgggcctgaaccttcaggcagctgatactgttgtc
atctttgatagtgattggaatcctcaccaggatttgcaggcccaagatcgagctcaccgg
attggccagcaaaatgaagtccgagtgcttagactctgtactgtaaacagcgtggaggaa
aagattcttgcagcagccaaatacaaattaaacgtggatcagaaagttattcaagcgggc
atgttcgatcagaaatcttcaagtcatgagaggagggcttttctgcaggctatattggag
catgaagaagaaaatgaggaagaagatgaagttcctgatgatgagaccctgaatcaaatg
attgcccgacgagaagaggaatttgatctttttatgcgtatggacatggaccgacgcaga
gaagatgcccggaacccaaaacgcaagcctcgcttgatggaagaagatgagctgccttcc
tggattattaaagatgatgctgaagtagaaaggcttacctgtgaagaagaggaagagaaa
atattcggcagagggtcccgccagcgcagggatgtggactacagtgatgcgctcacagag
aaacagtggctgagggcaattgaagacggtaatctggaagaaatggaagaggaagttcgg
ctcaagaaacgaaaaagacgaagaaatgtggagaaggagcctgggaaggaagatgtggaa
aaagctaaaaagagaagaggccgacctccagctgagaaattgtcgccaaatccccccaaa
ctgacaaagcagatgaatgccattattgacactgtaataaactacaaggatagttcaggg
cgacagctaagtgaagtcttcattcaacttccatcaaggaaagaattaccagaatactat
gaattaattaggaagccagtggatttcaaaaaaataaaggaaagaatccgtaatcacaaa
taccggagccttggtgatttggaaaaagatgttatgctactctgtcataatgctcaaaca
ttcaacttggagggatcacagatctatgaggactccattgttctacaatcagtgtttaag
agtgcacggcagaaaattgccaaagaagaagagagtgaggatgaaagcaatgatgaggaa
gaagaggaagatgaggatgaatccgaatctgaggcaaaatctgtgaaagtgaaaatcaag
cttaataaaaaagatgagaaaggccgggacaaaggaaaaggcaagaagaggcagagccga
ggaaaagccaaacctgttgtgagcgattatgacagtgatgaggagcaagatgagaatgat
cagtcagaagcaagtgggactgatgacgagtga
DBGET
integrated database retrieval system
