Phascolarctos cinereus (koala): 110219201
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Entry
110219201 CDS
T05867
Symbol
SMO
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04340
Hedgehog signaling pathway
pcw04360
Axon guidance
pcw05200
Pathways in cancer
pcw05205
Proteoglycans in cancer
pcw05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110219201 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110219201 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110219201 (SMO)
05205 Proteoglycans in cancer
110219201 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
110219201 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pcw04030
]
110219201 (SMO)
G protein-coupled receptors [BR:
pcw04030
]
Frizzled / Smoothened family
110219201 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
110219201
NCBI-ProteinID:
XP_020858009
UniProt:
A0A6P5LNF5
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MAAARPARGPALQLLGLKLLLLLLLLGGPGQGAALSGNRTGPGPWNGRASGAETGPPPLL
SHCGRAAPCEPLRYNVCLGSALPYEATSTLLAGDSGSQEEAHSKLVLWSGLRNAPRCWAV
IQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLKCTPDHFPEGCPNE
VQNIKFNSSGQCESPLVRTDNPNSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVT
GLCTFFTLATFVADWKNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTM
RLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFH
LLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIR
GVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWE
RSFRDYVLCQANVTIGLPTKKPITDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKAT
LLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVA
GLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVGTPVPPEEQANKWLVEAEI
SPELQKRLGRKKKRRKRKKEVCPLAPPTELCHPVPAPSAVPHLPQLPRQKCLVAGAWGTG
ETHRHGAWTLVSNPLCPEANSLQDPFLPIPPGPAAWAQGRRPCLAPIHSRTNLMEAELLD
ADSDF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggctcggcccgcgcgggggccggcgctccagctactggggctgaagctgctg
ctgctgttgctgctgctagggggcccgggccagggggcggctctgagcgggaacaggacc
gggcctggcccctggaacgggagagcgagtggggccgagactggcccgccccccctgttg
agccactgcggccgggcagccccttgtgagccgttgcgttataacgtgtgcctgggctcg
gcgctgccatacgaggccacctccacgctgctggccggggactcgggctcccaggaggag
gcgcacagcaagctcgtgctgtggtccggccttcggaatgctccccgctgctgggcagtg
attcagcccctgctctgtgccgtctacatgcccaagtgtgagaatgatcgggtagagctg
cccagccggaccctgtgccaggccactcggggaccctgtgctattgttgagcgggaacgg
ggctggcccgacttcctgaaatgcaccccagaccacttcccagaaggctgtccaaatgag
gtgcaaaacatcaagttcaacagctccggacaatgcgagtcgcccttggtacgcacagat
aaccccaacagctggtacgaggatgtggaaggctgtggtatccagtgccagaacccactc
ttcactgaggccgaacaccaggacatgcacagctatatcgctgcctttggcgccgtgact
ggcctctgcaccttctttaccctggccacatttgttgctgactggaagaattcgaaccgc
taccccgctgtcatcctcttctatgtcaatgcttgcttctttgtgggcagcatcggctgg
ctggcccagttcatggatggtgcccgccgggaaattgtctgcagagctgatggtaccatg
cggctaggggagcccacctccaatgaaaccctgtcctgtgtcatcatcttcgtcatcgta
tactatgcgctaatggcaggcgtggtctggtttgtggtgctcacctatgcttggcacacc
tctttcaaggctctgggcaccacctaccagcccctttctggcaagacttcctacttccac
ctgctcacctggtcactgccgtttgtcctcaccgtagccattcttgctgtggcccaggtg
gatggggactcggtgagtggcatctgttttgtgggctacaagaactaccgttaccgagct
ggtttcgtgttggcccctatcggtctggtgcttattgttgggggctatttcctcattcga
ggagttatgactctcttctctatcaaaagcaatcaccctgggttactgagcgagaaagca
gccagcaagatcaatgagaccatgcttcgtctgggcatttttggctttttagcctttggc
tttgtgctcatcaccttcagctgccatttctatgacttcttcaaccaggccgagtgggag
cgcagcttccgggactatgtactgtgccaggccaatgtgactatcgggctacctaccaag
aagcctattactgattgtgagatcaagaatcgtcccagccttctggtggaaaagatcaat
ctgtttgccatgtttggtactggtattgccatgagcacttgggtctggacaaaggctact
ctactcatctggaggcgcacctggtgcaggttgactgggcaaagtgatgacgaacccaaa
cggatcaagaaaagcaagatgattgccaaggctttctctaaacgtcgggaattactacag
aatccaggccaagagctcagcttcagcatgcatactgtgtcccatgatgggcctgtggcg
ggtttggcctttgatctcaatgagccctcagccgatgtctcctcagcctgggcccaacac
gtcaccaagatggtggcccgaaggggagctatcctgccccaggatgtatctgtcactcct
gtagggactccagtacccccagaagaacaagctaacaagtggctagttgaggcagagatc
tccccagagctgcagaaacgcctgggaaggaagaagaagaggaggaagaggaagaaagag
gtgtgccctctggcaccacccacagagctttgccatcctgtacctgcacctagtgcagtg
ccccacctgcctcagctaccccgacaaaagtgcctggtggcaggggcctggggaacaggg
gaaacccatcgacatggagcttggaccctggtctccaaccctctctgtccagaggcaaat
tctctccaggatccatttctaccaattccaccaggccctgcagcctgggctcaagggcgt
cggccttgtctagcccccattcattcccgtaccaacttaatggaggctgagttactggat
gctgactctgatttctga
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