Phascolarctos cinereus (koala): 110219473
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Entry
110219473 CDS
T05867
Symbol
BARD1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110219473 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110219473 (BARD1)
04121 Ubiquitin system [BR:
pcw04121
]
110219473 (BARD1)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110219473 (BARD1)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110219473 (BARD1)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110219473 (BARD1)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110219473 (BARD1)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110219473 (BARD1)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110219473 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
Ank_KRIT1
RTT107_BRCT_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
110219473
NCBI-ProteinID:
XP_020858499
UniProt:
A0A6P5LQ08
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MQREPPLRVRSGNQQWPEPAMQPAAGGGSGAGAWAHSRAALEQLETQLRCSRCINILREP
VCLGGCEHIFCSMCVGDCIGTECPVCHTPAWIQDVKINRQLDSMIQLCSKLRNLLHNTPG
SGLEESKPETRTSRDEDENKKFIKMWFSPRSKKVRYVLNKTSVQTHPKPVEDEQVYQAFE
FSSSSLEQDSPQRPKKVTRKTRKKQKKRSLAEINQEWDLEKEKQKEVQEFDQSTSEKLRE
KSVSFCIQPSVLETPELNGGIDLLSYASATEASPAEKASEICPSAAMQVDSVGVDIDSEV
ASSHMESLGENSFTSETSLLLNNGGTSETQPPDSFVVPVSKRPRRRSQQKSRRTSVSQDT
HTESLPPSEDNASSPTSKCIVDDPLLTARISDVLNDSISFSPSKSSGTPSSSIMNSPCRR
GVVSSPSTVRLSPTSPMTVKRNHRGETLLHIASIKGDIPSVEHLLQNGSDPNVKDHAGWT
PLHEACNHGHQKVVELLLQHKALVNTTGYQNDSPLHDAVRNGHVNIVKLLLSHGASQNSV
NIFGLRPVDYAETETMRSVLLLPEESEIHKISHCSGPVNASQRRDNPLILLSSGLTSDQQ
QLLNKLAAVLKAKKCTEFNSAVTHIIVPGDTIQRTMKCILGIISGCWILKFDWVKACLES
RMCELEEKYEMPGGPQRSRLNREQLLPKLFDGCYFYFEGTFKHHSKDELIKLAKASGGQV
LNRKPKPDSDVTQTINTVSYHARPDSDQRFCTQYIIYDAISNYHPERVRQGKVWMAPSNW
FIDCLMSFQVLPVTK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgagccgccgctgagggtccgctccgggaaccagcagtggccggagcccgcc
atgcagccggccgcaggagggggcagcggggccggggcttgggcccacagccgcgcggcg
ctggagcagctggagacgcagctgcgctgctcgcgctgcatcaatatcctgagggaaccg
gtgtgcttaggaggatgtgaacatatcttctgcagtatgtgcgtgggcgactgcatcggt
acggaatgtccagtgtgtcacacacctgcctggattcaggatgtgaagataaacagacaa
ttagacagcatgatccagctatgcagcaagcttcggaatctgttacacaacaccccgggt
tcaggtctagaagaaagtaaacctgagacaagaacctcacgagatgaagatgaaaacaag
aaattcataaaaatgtggttcagccctcgtagcaagaaggtcagatatgtcctaaataaa
acttcagtgcagacccatccgaagccagttgaggatgagcaggtttatcaggcctttgaa
tttagttcctcgtcccttgagcaagattctccccagaggcctaaaaaagtaaccaggaaa
accagaaaaaagcagaaaaagagaagtttagccgaaattaatcaggaatgggatttagag
aaggaaaagcaaaaagaggtccaggaatttgatcagagtaccagcgagaaacttagagaa
aagtcagtctcattctgtattcagccctctgttctcgagaccccagaactaaatggtggt
atagatttactgagttatgcctctgcaacagaggccagtcctgctgaaaaggcgagtgag
atctgcccatcagccgccatgcaagtagattctgtaggagtcgatatagatagcgaggta
gcatcatctcacatggaatctcttggtgagaatagttttacatcagagacatccctgcta
ttgaataatggtggaacaagtgagacgcagccccctgactcttttgtggtgcctgtttct
aaaagacctagaagaagaagccagcagaaatccagaagaacatctgtcagtcaagatacc
cacacagagtcgttaccgccatctgaagataatgcctcatctcccacatccaaatgtata
gttgatgacccattattaacggcaagaatcagtgatgtattaaatgactctattagcttt
tccccttcaaaatcttctggcactccatcatcatccataatgaatagcccttgtcgacgg
ggggtggtgtctagcccttccactgtgaggctgtctcccactagccctatgaccgtcaag
agaaaccatagaggagaaactctgctccatattgcttctattaagggtgacataccatct
gttgaacacctcctccaaaatggaagtgacccaaatgttaaagaccatgctggatggact
ccattgcacgaagcctgtaatcatggacatcagaaggttgtggagctgctgttacaacac
aaggctttggtaaacaccactggctaccagaatgactcaccacttcatgatgcggtcaga
aatgggcacgtgaacattgtcaagctgttactgtcccatggagcctctcaaaactcggta
aacatatttggtctccggcctgtggattatgcagagactgaaactatgagatccgtattg
ttgctgcccgaggagagtgaaatacacaaaattagccattgctcaggtcccgtgaatgct
agccagcgaagagataaccccctcatactcctcagcagtggcctcacttcagatcagcaa
cagttgctaaataagcttgcagcagttcttaaggctaaaaagtgtactgagtttaatagc
gcagtcactcatatcattgttcctggcgatacaatccaaagaaccatgaagtgtattctc
ggcatcatcagtgggtgctggatcctaaaatttgattgggtaaaagcctgtctagaaagc
agaatgtgtgaactagaggaaaagtatgaaatgcctggtggtccacagagaagcaggctc
aacagagaacagctgctgccaaagttatttgatggctgttacttctattttgaggggact
ttcaagcatcattccaaggatgagcttataaaactggccaaagcatctggagggcaggtt
ctcaatagaaagccaaaaccagacagtgacgtgactcagacgatcaatacagtatcatac
catgccagacctgactctgatcagcggttctgcacacagtatatcatctatgatgccatc
tctaattatcatccagagagggttcgtcagggcaaagtctggatggctccttccaactgg
tttatagactgcttgatgtcatttcaggtgctccctgttaccaagtga
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