Phascolarctos cinereus (koala): 110220077
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Entry
110220077 CDS
T05867
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110220077 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110220077 (CHD8)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110220077 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
110220077
NCBI-ProteinID:
XP_020859621
UniProt:
A0A6P5LTS6
LinkDB
All DBs
Position
Unknown
AA seq
2589 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTRDPIEEALGLPSTLDSLDQMNQDGGSSDLGS
SSSGLPPPTEETPPTEPPKESAAPAPESLTLHDYTTPPVGQEQPNQTILQAPPPPTGLLQ
VSKGQEILSQGNPFMGVSTTAVSSSSGAGQPPQTAPKIVILKAPPGTSVTGAHVAQIQAQ
AITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNAVLATKVTGGQATVQRIVQP
SRPVKQLVLQPVKSSTATGNPGTGATPLKPAVTLTSAPTQGESKRITLVLQQPQSGGPQG
HRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVQQPPSSQ
QQQQQPPSAQPVTLSSVQPAQIMGPGQSPGQRLTVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPATPAPHTGGKAGVEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKTTGERLKEEKPKKSKASGASKSKGRSKLNTITPVVS
KKRKRNTSSDNSDVEVMPAQSPREEEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPVKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSR
HPELKRVSRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHAY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTLF
QDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEAP
TNWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSDI
VEGVDFDKDCEDPEYKPLQGPPKDQEDEGDPLMMMDEEISVIDSDEVQVTQQPGHLFWPP
GSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTRR
EESDFYRVVSTFGVEFDPDTLHFHWGRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLP
PAAGDESPDPTLFIEPITEERASRTLFRIELLRRLREQVLCHPLLEDRLALCQPPGPELP
KWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQSQQAGAPAPSLSRCS
TPLLHQQYASSTASPLPLRPDAPTEKLPEEATTRGPSLESLALKLEHEVLAKNRSTPQDY
ELRIAPSDPTPMASHSVPPVKLEEEDDSDSELDLSKLSPSSSSSSSSSSSSSSTEDSEDE
KEEKLSADQSCSKLYDEESLMSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRVL
INRIDLVCQAVLSGKWPSNRRNQEMVTGGSLGQGNHLLDSPLLAPGEYGDSPVPTPRSSS
AASMAEEEVAAVSTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVLGEGH
PLFHKKKGNRKKLVELEVECMEEPHHLDVDLEARIPVINKVDGTLLVGEDAPRRAELEMW
LQGHPEFAVDPRFLAYMEDHRKQKWLRCKKPNKAEMGCLGIEQVQTVNSRNGKKGHLPDT
MFNRVLPGPVAPDNSKKRARRVRPDLSKMVALMQGGGSGPLSLHSNFQHGSSGLQPVSSL
GHSSATSTSLPFVPFVMGGTVSSPHVDSSTMLHHQHHHHHHHHHHHHHPGLRASSYPSMP
ATTTSAGTALRLPPLQPEEEEEEEEEEEEDEEEEDDDLSQGYDSSERDFSLIDDPMMPAN
SDSSEDADD
NT seq
7770 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctttttgatgaccccaatttatttggcctggactctcta
actgatgacagcttcaaccaagtcacaagagaccccatagaagaagcccttggactgcca
agtactctggattccttagatcagatgaatcaggatggtggaagcagtgacttaggaagt
tcatcaagtggcctgccccctccaacagaggaaacccctcctacagaacctcccaaagaa
tcagcagctccagccccagagtcactgaccttgcatgactataccactccaccagtaggc
caggaacaacccaaccaaactatcttacaggcaccaccgccgccaacaggacttcttcag
gtctctaagggccaggagatattaagccaaggaaatccttttatgggtgtctctaccaca
gctgtctcttccagcagtggtgcagggcagccccctcagacagcccccaagattgtcatc
ctcaaagccccacctggtacctcagttacaggtgctcatgtggcacagatccaagcccag
gccatcaccagcacagcacagcctttagtggctggcacagccaatggtggtaaagtcact
tttaccaaggtgctaactggtactccacttcgaccaggtgtctccattgtttctggcaat
gcagtcttggccacaaaggtcactggaggccaggccacagtgcagcgcattgttcaaccc
agccggccagtaaagcagctggtcctgcagccggttaagagttctactgcaactggaaac
ccggggactggagcaacacccctgaagcctgctgtcacactgacctcagctcccactcag
ggtgaatcaaagcgcatcactctggttctccagcagcctcagtcaggggggcctcaaggc
catcggcatgtcgtactagggagtctgccaggcaagattgtgttgcagggcaaccagctg
gcagccctgactcaggccaagaatgcccaggggcagcctgccaaagtggtgactatccag
ctgcaggtgcagcagcctcagcaaaagattcagattgtacagcaaccaccctcatcccag
cagcagcagcagcagccaccctcagcccagccagtgacgctttcctcagtgcagccagcc
cagattatgggaccaggacaaagcccaggccaaagacttacggtaccactcaaagtggtg
cttcaacctcaggctggctcttcccaaggggcttcctctggcctgtcagtggttaaagtg
ttgagtgccagcgaggtggcagctctatcttctccagccacccctgctcctcacaccggg
ggaaaggctggtgtggaggaaaaccgaaggctagaacaccagaagaaacaagagaaagct
aataggatagtggcagaggccattgccagagctcgagcccgaggtgagcaaaatattcca
cgagtcttaaatgaagatgagttgcccagtgtccgacctgaggaagaaggtgagaagaaa
cgcaggaagaagaccactggagagaggctcaaggaagagaagccaaaaaagagcaaagca
tctggtgcctccaagtccaaaggcaggagtaagctcaacaccattactcctgtggtgagt
aagaagaggaaacgcaacacctcatctgacaattctgatgtggaagtcatgcctgcacaa
tcacccagggaggaggaagagagcagcattcagaagagacgctcaaaccgacaagtgaag
agaaaaaaatacacagaggatttggacattaagatcacagatgatgaggaggaagaagag
gtagatgtgactggtccagtcaagcctgagcccattctgcctgagccagttcaggaacct
gatggagagacattaccatccatgcagttctttgtggagaaccccagtgaagaagatgca
gccattgtggacaaagtgctttctatgcgggtggtgaagaaggagcttccctctggacag
tacacagaagcagaggaattttttgtcaagtataagaactattcttatttgcattgtgaa
tgggccactatctctcagttagagaaagacaagaggatccatcagaaacttaagcggttc
aaaaccaaaatggctcaaatgagacacttctttcatgaggatgaagagccctttaatcca
gactatgtggaagtggacaggatattggatgagtctcacagtattgacaaagacaatggt
gagcctgtaatttactacctggtcaaatggtgttctctaccctatgaggatagtacttgg
gaactgaaagaagatgtggatgagggcaaagtgcgagagtttaagcggatccagtcaagg
cacccagagctcaaaagggtgagtcgtcctcaggcaagtgcctggaagaaattagaatta
tcacatgagtacaaaaaccggaatcaactacgagaatatcagctagaaggggtcaactgg
ctactttttaactggtacaacaggcagaactgtatcctggctgatgaaatgggactgggc
aaaacaattcagtccattgccttcttacaagaggaatataatgtaggcatccatggtccc
ttcctggtcattgccccactgtctacgattaccaactgggagagagagttcaatacgtgg
acagaaatgaacactatcgtgtatcatggcagtctggccagccggcaaatgatccagcaa
tatgagatgtactgcaaagattcacgggggcggcttatccctggggcgtataagtttgat
gccttgatcaccacttttgagatgattttgtcagactgccctgagctacgggagattgaa
tggcgttgtgtcattattgatgaggctcatcgactcaaaaatcggaattgcaagctgctt
gatagtctcaagcacatggacttggagcataaagtgctgcttacaggaacacccctgcaa
aacactgtggaagaactgtttagcttgttgcacttcttggaaccttcacagtttccttca
gaatcagagttcctcaaggactttggtgatctcaagacagaagagcaggtccagaagcta
caggctattctgaagccaatgatgttgagaaggctcaaagaagatgtggaaaaaaatcta
gctcccaaacaggagacaatcattgaagtggagttaaccaacatccaaaagaagtattat
cgtgctatcttggaaaaaaacttctccttcctttccaaaggagcaggtcacacaaacatg
cccaacctacttaacacaatgatggagctgcgtaaatgttgtaatcatccatatctcatc
aatggcgcagaggaaaaaatcctaacagaatttcgggaggcctgccatatcatcccccat
gacttccatcttcaagccatggtccgctcagctggtaaactggttctcattgacaagcta
cttccgaaactcaaggctggtggtcataaggtgctgatcttctcccagatggttcgatgc
ctggatatcctggaggattacttgatccaaagaaggtacttatatgagcgtattgatgga
cgtgtgcgaggtaacctgcgtcaggctgccattgaccgatttagtaagcctgattctgac
cgatttgtcttcttactttgtacccgagctgggggccttggtatcaaccttacagctgca
gatacttgcatcatctttgattcagactggaacccacaaaatgatttacaggctcaagca
cgttgtcatcgaatagggcaaagcaaagctgtaaaagtttaccgcctcatcactcgaaac
tcttatgagagggagatgtttgataaggccagcctcaagttgggactggataaagcagta
cttcagtccatgagtggtcgggacggcaacatcactgggattcagcagttctccaagaag
gagattgaggacctcttaaggaaaggtgcttatgcagccattatggaagaagatgatgag
ggttccaagttttgtgaagaagatattgaccaaattttactaaggcgtaccactaccatc
accattgaatctgaggggaaagggtccacctttgctaaggctagctttgttgcttctgaa
aataggacagatatttctctggatgatcctaacttctggcaaaagtgggctaaaaaagct
gacctagatatggatttactcaacagcaagaataacttggtgattgatacaccgcgagtg
cgcaagcagacacgacattttagcactctgaaagatgacgacctggtggaattctcagat
ttggaaagtgaggatgatgagcggcctcgatcccgccgacatgacaggcatcatgcctat
ggacgcactgactgcttccgtgtggaaaagcacctcttggtgtatggctggggtcgctgg
cgagatattctgtcccatgggcggttcaaacgaagaatgactgaacgggatgtggagacg
atctgccgtgccattcttgtgtactgtcttctgcactaccgtggggatgaaaacatcaaa
ggcttcatttgggacctcatcagccctgcagagaatggcaaaacaaaagaactacagaac
cattcaggtttgtctatcccagtgccccggggacgcaaagggaagaaagtgaagtcccaa
agtacctttgatatccacaaagcagactggatccggaaatataaccctgacaccctcttc
caggatgaaagttataagaaacacttgaaacatcagtgtaacaaggtgttgttgcgagta
cgcatgttgtattaccttcggcaagaggttattggtgatcaggcggagaaggtgttggga
ggtgccattgctagtgagattgatatatggttcccagtggtggatcagttggaggcccca
acaaactggtgggatagtgaagctgacaagtccttgctcataggagtctttaaacatggc
tatgagaaatacaataccatgagagcagacccagccttatgctttctggaaaaggctggc
cggccagatgacaaagccattgcagcagagcatcgagtgttggacaatttttctgatatc
gtggaaggggttgactttgataaggactgtgaagatcctgaatacaagccacttcaaggc
cccccaaaggaccaagaggatgagggtgaccctttgatgatgatggatgaggagatttca
gtgattgacagtgatgaagtccaggtgacccagcagccaggtcatctcttctggcctcca
ggctcagccctgacagccagactgcggcgtctggttactgcctatcaacgtagctacaag
cgagaacagatgaagatagaggcagcagagcgtggggaccggcggcgacgacgttgtgag
gcagccttcaaactgaaagaaattgcacggcgagagaagcagcagcgatggacaaggcgt
gaggaatcagatttctaccgggtggtgtcaacctttggagtagagtttgatcctgacacc
ctacacttccactggggtcgattccgtacatttgcccgtctggacaaaaaaacagatgaa
agccttactaagtacttccatggttttgtggccatgtgccgacaggtgtgccgtctaccc
cctgctgctggagatgaatctccagaccccactctattcattgaacccatcacggaggag
agggcctcacgcactcttttccgaattgagttgcttcggagattacgggaacaagtacta
tgccatccgttattagaagaccgattggctttgtgccaacccccaggccctgaattgccc
aagtggtgggaaccagttcgacatgatggggaacttctccgaggggcagctcgccatggg
gtgagccaaacagactgcaatattatgcaggacccagacttctccttcctggctgctcgt
atgaattacatgcagagccaacaggcaggggcacctgctccatccctgtcacgctgttct
accccactcctacaccaacagtatgcctcgagcactgcctcaccactgccgctacgtcca
gatgctcctactgaaaagctaccagaggaggcaacaacccgtggccccagcctggagagt
ctggccttaaaactagagcatgaggtgttggccaaaaataggtcaaccccacaagactat
gagctacggatcgccccctctgatcctacccccatggcttcccacagtgttccaccagtc
aaactggaggaagaggatgattcggactctgagctggacttaagcaaactgtcaccatct
tcctcctcttcttcctcctcatccagctccagctcgagcactgaagatagtgaagatgaa
aaggaagagaagctgagtgctgaccagtcctgctccaagctctatgatgaagagagtctc
atgtccctcactatgtcccaggatggattccctaatgaagatggagagcaaatgactcct
gaactgttgctgcttcaggagaggcagagagcttctgaatggcccaaggatcgtgtcctg
ataaaccgcattgacctcgtctgccaggctgtcctctcagggaaatggccctccaaccgc
cgcaaccaagaaatggtgactggagggtcactgggacaaggcaaccatctgctggatagt
cctctgctggctccaggcgaatatggtgactcacctgtgcccacacctcgaagtagtagt
gcagcttcaatggcagaagaggaggtggctgctgttagtactgctgcagcccagttcacc
aaacttcgacggggcatggatgagaaggaatttacagtccagatcaaagatgaagaagga
ttgaaattgacgttccagaaacataagttgatggccaatggagtgctaggagaaggacat
ccactattccataagaagaaggggaaccgaaagaagctagtggagctggaggtggagtgt
atggaggagcctcatcaccttgatgtagacttggaagcccggattcctgtcatcaataag
gtcgatggcactttactggtgggtgaggatgcccctcgtcgggctgagctggaaatgtgg
ttacaaggtcatccagaatttgctgttgatcctcggttcctagcttatatggaagatcac
cgaaaacagaaatggctcagatgtaaaaaacccaataaggcagagatgggttgtttggga
atcgaacaagtgcaaacagtcaattcccggaatggaaagaagggtcatctccctgacact
atgttcaaccgggtcttaccaggcccagttgcaccagacaatagcaagaagcgggcccgc
agggtacggccagacctctccaagatggtggccttgatgcagggtgggggctctggaccc
ctctctttgcatagtaacttccagcatggtagcagtggcctacaacctgtgtcatcacta
ggtcacagcagtgccacctctacatctttgccttttgtgccatttgtgatgggaggtaca
gtctcatcccctcatgtagactccagcacaatgcttcatcaccaacatcaccaccaccat
caccaccaccaccatcatcaccatccaggcctgagagcttctagctacccttccatgcca
gctaccaccacctctgcaggcacagccctcaggttgccaccactgcaacctgaggaggaa
gaggaggaggaagaagaggaagaagaagatgaggaggaagaagatgatgacttatctcag
ggctatgatagctcagaaagagacttctcactcattgatgaccctatgatgccagccaac
tcggactccagtgaagatgctgatgactga
DBGET
integrated database retrieval system
