Phascolarctos cinereus (koala): 110220495
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Entry
110220495 CDS
T05867
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03015
mRNA surveillance pathway
pcw03040
Spliceosome
pcw05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110220495 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
110220495 (NCBP1)
03015 mRNA surveillance pathway
110220495 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110220495 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110220495 (NCBP1)
03041 Spliceosome [BR:
pcw03041
]
110220495 (NCBP1)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
110220495 (NCBP1)
Spliceosome [BR:
pcw03041
]
Common components
Common spliceosomal components
Cap binding complex
110220495 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
110220495
NCBI-ProteinID:
XP_020860185
UniProt:
A0A6P5LP19
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRHSDENDEQPHKRKKTLQSIEIEDRIESLICRVGEKSTFSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLFPLKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNY
DEAVILVHFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVFAFLSSLPWVG
KELYEKKDAEMDRIFSTVENYLKRRQKTHVPLLQVWTADKPHPQEEYLDCLWAQIQKLKK
DRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEEHLHFIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELFQ
LPVPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDFENPKPKFVREVLEKCMRLSYHQRILDIVPPAFAPLCPANP
TCIYKYGDESSNSLPGHSVALCLAVAFKSKASNDEIFSILKDVPNPNQDDDDDEGFSFNP
LKIEVFVQTLLHLASKSFSHSFSALAKFHEVFKMLAESDEGKLHVLRVMFEVWRNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFIWEILHSTIRKMNKHVVKIQKELEE
TKEKLARQHKRRDDRSSDRDDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEH
LVRCETDGTNILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAVFQQ
FCALQACGFFPPSS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaatgatgaacaaccccacaaaaggaagaagact
ttgcaatccattgaaattgaagatcggatagaatctttgatatgcagagtaggagaaaag
agtaccttctcattggaaagcaacctggaaggcttagctggtgttttggaggctgatctt
cctaactacaagagcaagattctaagaattctttgtacagttgcgcgtctgtttcctttg
aaattgacggtttatacaacattagttggactacttaatgcccgaaattacaactttggt
ggggaatttgtggaagccatgattcgtcaacttaaagaatctttgaaagcaaacaactat
gatgaagctgtgattttggtccattttttatcagatttggtgaattgtcatgtaatagct
gctccatcaatggtagctatgtttgaaaattttgtaagtgtaactcaggaagaagacgta
cctcaggtacgacgtgattggtatgtgtttgcatttctgtcatctttgccctgggttgga
aaggagttatatgaaaaaaaagatgcagagatggatcgcatcttttccactgttgaaaac
tatcttaaaagacgtcaaaaaactcatgttccattgttacaagtgtggactgctgataaa
ccacatccacaagaagagtatttagactgcctttgggcccagattcagaaattaaaaaaa
gatcgctggcaggaacggcacatcctgagaccataccttgcctttgacagcatcctctgt
gaagccttgcagcacaatctgcctccttttacaccaccacctcacacggaggactcggtg
tacccaatgccaagggtcatctttaggatgtttgattacactgatgatcctgagggtcct
gttatgccaggcagtcattctgtggagagatttgtgatagaagaacatcttcacttcatc
attaaatcccactggaaggaaaggaagacatgtgctgcacaactagtgagctatccagga
aagaacaagatccccttgaattatcatatagtcgaggtgatctttgcagaactatttcag
cttcctgtaccccctcacattgatgttatgtacacaacacttcttattgaactgtgcaag
cttcagcctggttctttaccccaagttcttgcacaggcaactgaaatgttgtacatgcgt
ttggatacaatgaatactacgtgtatagacaggttcattaattggttttcccatcaccta
agtaacttccaattccgttggagttgggaagattggtcagattgtcttacccaggatttt
gaaaatcccaagccaaaatttgtaagagaagtactggaaaaatgtatgaggctttcatac
catcagcgcatattagatattgttcctccagcttttgctcctctgtgtccagcaaaccca
acgtgcatttacaagtatggagatgaaagtagcaattctcttccaggacattctgtagcc
ctctgtttagctgttgcctttaaaagtaaggcaagtaatgatgaaatcttcagcattttg
aaagatgtgccgaatcctaaccaagatgatgatgatgatgaaggattcagttttaaccca
ttgaaaatagaagtctttgttcagactctgcttcatcttgcttctaagtcttttagccac
tctttcagtgctcttgcaaagtttcatgaagtcttcaaaatgcttgcagaaagtgatgag
ggaaagttacatgttctgagggtcatgtttgaagtctggaggaatcatccccagatgatt
gctgtattagttgataagatgattcgaacacagattgtggactgtgctgcagtagcaaat
tggatcttctcttcagaactctctcgtgattttactaggttgtttatctgggaaatttta
cactccacaattcgaaagatgaacaaacatgtggtgaaaatccagaaagaattggaggaa
actaaagaaaaacttgcaagacagcacaaacggcgtgatgacagaagcagtgacagggac
gatggggcattagaggagcaaatagaacgtctgcaggaaaaagtcgagtcagctcagagt
gagcaaaagaatcttttcctcgtcatatttcagcgctttatcatgatactgacagaacac
ttggtacgatgtgagacggatgggaccaatatattaacaccttggtacaagaactgtata
gagaggctacagcagatcttcttgcagcatcatcagataatccaacagtacatggtgacc
ttggaaaaccttctctttactgctgaattggaccatcatattttggctgtattccaacag
ttctgtgctctgcaggcctgcggattttttcctccttcgagttga
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