Phascolarctos cinereus (koala): 110220730
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Entry
110220730 CDS
T05867
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04622
RIG-I-like receptor signaling pathway
pcw05161
Hepatitis B
pcw05162
Measles
pcw05164
Influenza A
pcw05168
Herpes simplex virus 1 infection
pcw05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110220730 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
110220730 (IFIH1)
05171 Coronavirus disease - COVID-19
110220730 (IFIH1)
05164 Influenza A
110220730 (IFIH1)
05162 Measles
110220730 (IFIH1)
05168 Herpes simplex virus 1 infection
110220730 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcw04054
]
110220730 (IFIH1)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110220730 (IFIH1)
Pattern recognition receptors [BR:
pcw04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
110220730 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
110220730
NCBI-ProteinID:
XP_020860544
UniProt:
A0A6P5LWH7
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MSSEYSREEKIFLNLIRCLSPRLTQYIQVEPVLDYLTFLGRVEKERIQHTAATKGNTIAA
RLLLSTLEKGTWGPGWTQVFLTGLRKGGCTLAARYMSPDLADLPSPSLETCYDQCAQLLD
ILQPTLVDKLQATDVVDKCLEKALLTKEDRNRVVHLDENYGNERAVRELLSRIVQKEDWF
SKFLSILHEATYVQLAEDLTGINCLKDNEEIKENGIEKLSPKDGHVIEETLISLSDHQEE
ENDSLTVENDELESSLADSSVVSESDTSLAEGSVSCLDESLGHNSNMGSVSGTMGSDSDQ
DDEKKRAFPEPELVLRSYQMEVAKPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKA
SEPGKVMVLVNKVPLVEQHFRKEFKPFLKKWYNVIGVSGDSQLKISFPEVVKSNDVIIST
AQILENSLLNSENGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMIRYLKQKMKNCRLKK
ENKPVVPQPQILGLTASPGVGGAKKQSKAEEHILKICANLDAYTIITVKENAALLKEQVK
EPYKKFVIADDNRENPFKKKLLEIMTDIHTFSQMNPTSDFGTQTYEHWVIHQEKRAAKEG
NRKERVCAEHLRKYNEALQINDTIRMIDAYHHLKSFYNDEKEKKIAAQEYDSEEEEEEEE
DNNKKKLLKLDETDLFLLELFYENKKKLKKLAITPDHENEKLTKLRNTIMEEFTKTDGSV
ARGIIFTKTRQSAFALSQWINDIEKFAEVGVKAHHLIGAGNSSEFKPMTQNEQKEVINNF
RTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMLQARGRARADESTYVLVASGGS
GVVERESVNLYREKMMHKAIDRVQNMNLEEYAHKILELQMQSIMEKKMKTKKSLAKQLKD
NPSLITFFCKNCGVMACSGENIQVIEDMHHVNMTREFKKLYIVRENKALRKKFTDYQTNG
EIICSQCGQAWGTMMVNKGLDLPCLKIKNFVVAFKNNSQKKQYKKWVELPMMFPKLDYTE
HCMFSDED
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgaatattcccgggaggagaagattttccttaatctgatccggtgcttgagt
ccgaggctgacacaatatatccaagtggaaccagtgctggactacctgactttcctgggg
agagttgagaaagaacgtattcagcacaccgctgctactaagggaaacacgatagccgca
aggttactgttgagcacattagagaaagggacctggggacctggctggactcaagtgttt
ctcacagggcttaggaaagggggctgcactttagctgctcgatacatgagcccagacctc
gctgacttgccttctccatcgttagagacctgttatgatcagtgtgcccagctgctggac
attttgcaacccaccctggtcgacaagcttcaagctactgatgttgtggacaaatgcttg
gaaaaggctctgctaacgaaggaagataggaatcgggttgttcatcttgatgaaaattat
ggaaatgaacgtgctgtcagggaactgctgagcagaatagtgcaaaaagaagattggttt
tctaaatttctgagtattcttcatgaagctacctatgttcaacttgctgaagacctcaca
ggcattaactgcttgaaagacaatgaagagattaaggaaaatggaattgaaaaattatcc
ccaaaggatggtcatgtcattgaagagacacttatttctttatcggatcatcaagaagaa
gaaaatgatagtctaactgttgaaaatgatgaattggaatcatctttggccgactcttct
gtggtttcagaatcagacacaagtttggcagaaggaagtgtcagctgcttagatgaaagt
cttggacataacagcaacatgggcagtgtttcaggcaccatgggaagtgattcagaccaa
gatgatgagaagaaaagagcatttcctgagccggaactggtcctcaggtcctaccaaatg
gaagtggccaaaccagctttagaagggaagaatattattatatgcctccctacaggaagt
gggaaaacaagagtagccgtttacattgccaaggatcacttagataagaagaaaaaagca
tcagagcctggaaaagtaatggtgcttgtgaataaggtaccgttagttgaacagcacttc
cgtaaagaatttaaaccattcttgaagaaatggtataacgtcattggagtaagtggtgat
tctcaactgaagatatcattcccagaagttgtaaaatccaatgatgttattatcagtaca
gcacaaatcttggagaattcccttttgaattcagagaatggagaagatgatggtgtccag
ttatcagatttttccctcattattatcgatgaatgccatcataccaacaaagaagctgtc
tataataatataatgatacgttatctgaaacaaaagatgaagaattgtcgactcaagaag
gaaaataaaccagtggtacctcaacctcaaatacttggactgacagcttcacctggtgtg
ggaggggccaaaaagcaatctaaagctgaagaacatattttaaaaatatgtgctaatctt
gatgcctatacaattatcactgttaaagaaaatgctgcccttttaaaagaacaagtgaag
gaaccctataagaagtttgtgattgcagatgacaacagagaaaatccatttaaaaagaaa
cttctagaaataatgacagacattcatacctttagtcaaatgaatccaacatctgatttt
gggacacaaacctatgaacactgggtcattcatcaggaaaaaagagctgcaaaagaaggg
aatcgcaaagaacgtgtttgtgcagagcatttgaggaagtacaatgaagctctacaaatc
aatgacacgatccgaatgatagatgcataccaccacctcaaaagtttctataatgatgaa
aaggagaagaagatagcagcccaagagtacgatagtgaggaggaggaggaagaggaggaa
gataataataaaaagaaactgttgaaattagatgaaacagatctgtttcttctagaatta
ttttatgaaaataagaaaaaattgaaaaagctggccatcactccagatcatgaaaatgaa
aaattgaccaaattaagaaacaccataatggaagagtttactaaaactgatggatctgta
gcgcgaggaataatcttcaccaagactcggcaaagtgcatttgctctctctcagtggatt
aatgacattgaaaaatttgctgaagtaggagtaaaagctcaccatctgattggggctgga
aatagcagtgaatttaaacccatgacacagaatgaacaaaaggaagtaattaataatttt
cgtactggaaaaataaacctacttattgctaccacagtagctgaagaaggcctggatata
aaagaatgtaatattgttatccgttatggtcttgtcaccaatgaaatagccatgttacag
gcccgaggtcgagctcgagctgatgaaagcacatatgtgttggtggcaagtggtggctca
ggagtggttgaacgtgaaagtgttaatttgtatcgtgagaagatgatgcacaaagctatt
gaccgagttcaaaatatgaatctagaggagtatgctcataagattttggagttacaaatg
caaagtataatggaaaagaaaatgaaaactaagaaaagtcttgcaaagcaattaaaggac
aatccatcattaattaccttcttctgtaaaaactgtggtgtgatggcctgttctggagaa
aacatccaagtgattgaggacatgcatcatgtcaacatgacacgggaatttaagaaactc
tacatcgtaagagaaaataaagcacttcgaaagaaattcacagactatcaaacaaacggt
gagatcatttgcagtcagtgtggccaggcctggggaactatgatggtgaacaaaggttta
gacttaccttgtctcaaaataaaaaattttgtggtggcttttaaaaataattcccaaaag
aaacagtacaaaaagtgggtggaattgcccatgatgtttccaaagcttgactacacagaa
cattgtatgtttagtgatgaagattaa
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