Phascolarctos cinereus (koala): 110220879
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Entry
110220879 CDS
T05867
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcw04515
]
110220879
Cell adhesion molecules [BR:
pcw04515
]
Cadherins
Protocadherins
110220879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
MAP17
Motif
Other DBs
NCBI-GeneID:
110220879
NCBI-ProteinID:
XP_020860780
UniProt:
A0A6P5LQI9
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MEPREESIPLQRQVLLLLVLLCVYVSASEPGRFSVAEEMESRSSVGNVAKALGLEVGELS
ARGARITSKGKKQHLQLNIQTGDLLLKEKLDREELCGPADPCVLPFQILLENPLHIIPAE
LRVLDINDHAPMFPDSEMLLKIRENSPPESLFSLKNAIDLDVGINNVQNYTVNPSSHFRV
HTRTRSDGRKYPELVLDKTLDREEQPEFALTLTAVDGGSPPKSGTAQIRVLVVDINDNTP
VFAQPQYEVQIPEDSPIDSLVVTVSARDLDIGSNGEISYALIQSSEEISQTFKVNPFSGE
IRLKKQVDFEMIQSYEVDIEATDGGGLSGKCTVRIHVMDLNDNPPELALSSLNSPIPEDS
FQVVVAVFSISDRDSGDKGKMVCSIQDNVPFILKSSLENFYTLVTDGVLDREIRDEYNIT
ITVTDLGSPRLKTEQNITVLISDVNDNSPVFTQTAYTLYLRENNSPAFYIGSVSASDRDW
GSNAKVIYSLLPPKTGDLPLFSYISINSDNGHLYVLRSLDYEVIQAFQFTVRAADGGSPS
LSSQALVQVLVEDENDNSPFVLYPLQNGTAPCNDLVPRAAEPGYLVTKVVAVDRDWGQNS
WLSYQLTKATNPGLFTMWAHNGEVRTARPISDRDAIKQRLLVLVKDNGQPPLSTMATLNV
LLVDGFSEPYLQLPDAPKEQAQTDSLTIYLVISLASVSFLFLVSVILFIAVHLWKRKKNA
TDGLQLRPNSSFPGHFVNVGGTGTLSQSYHYEVCLTNDSGTGEFKFLKPIIPSLPTQDSG
RDLEESPPLQESFWLG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagccccgagaggagtcaattccacttcaaaggcaagttctccttcttcttgttttg
ctctgtgtgtatgtgtcggcttccgaacccgggaggttttcagtggcggaggaaatggag
agtagatcttctgtaggcaatgtggcaaaggccctgggcttggaggttggggaactatct
gccaggggtgctcggattacttccaaaggcaaaaaacagcacttacagctcaacattcag
accggggatctccttctaaaggagaaacttgaccgggaggagctgtgcggccctgcggat
ccctgtgtgctgcctttccagattttactggaaaatccccttcacataattcctgcagaa
ctgagagtgctagatataaatgaccacgcgcccatgttcccagacagtgaaatgctcttg
aaaatccgcgagaatagcccaccggagtctctattttctctgaaaaacgcgatagatttg
gatgtaggtatcaacaatgttcagaactacacagtcaaccccagctcccattttcgtgtt
cacactagaacccgcagtgacggcaggaagtacccagagctggtcttggacaaaaccctg
gatcgtgaggagcagccagagttcgctttaaccctcacagcagtggatggtgggtccccg
cccaagtctgggacagcccaaatccgagtcctggttgtggacatcaatgataatactcct
gtatttgctcagccccagtatgaggttcagattcctgaggacagccccatcgattccctg
gttgtcactgtgtctgccagagacttggacataggaagcaatggtgaaatctcgtatgca
cttattcagagttcggaggagattagccaaacgttcaaagtaaaccccttctcgggagaa
attcgactgaaaaaacaagtggatttcgagatgattcagtcatacgaggtggatattgag
gccaccgatggtggaggcctttctggaaaatgcactgtccgaatccatgtaatggattta
aatgacaatcctccagaattagccttatcctctttaaatagccccatccccgaggattct
tttcaggtcgtcgtcgctgttttcagcatttcagaccgggactcaggagacaaaggaaag
atggtttgctccatccaagataatgtccccttcatcctaaaatcgtctttggagaacttc
tataccctggtaactgatggggtcctggacagagagatcagagatgagtacaacatcacc
attactgtcacggatttgggatcccccaggcttaaaaccgagcaaaatatcacagtgctg
atctccgacgtcaacgataactctccagtgtttactcagacagcttacacgctctatctc
cgggagaataacagccctgccttctacattggcagtgtcagtgccagtgacagggactgg
ggttccaatgctaaagtcatctactctttgctgcctccaaagactggagatctgcccctc
ttctcctacatctccatcaactcagacaatggacatctctatgttctgagatccctggat
tatgaagttatccaagctttccaattcactgtgagggcagctgatggtggttccccgtct
ctgagcagccaggctctagttcaggttttggtagaagatgagaatgataactctcccttt
gtgctgtaccccctgcagaatggcacagctccctgcaatgacctggtgcccagagcagca
gagccaggttatctggtgaccaaggtggtggctgtggatagggactggggacagaattcc
tggctttcctatcaattaaccaaggccacaaacccaggactcttcactatgtgggctcac
aatggggaagttcgaacagcaaggcccatcagtgatagagatgccatcaagcagaggctc
ctggtgctggtgaaggacaatgggcagccacctctgtccacaatggccacactcaatgtg
ctcctggtggacggattctctgagccttacttgcagctcccagatgcacccaaggagcag
gcccagactgactccctcaccatttatttggtcatttctctagcttctgtctccttcctt
tttcttgtttctgtgattctgttcattgctgtgcacttgtggaaaaggaagaagaatgcc
actgatggccttcagcttaggcccaatagttcattcccaggccactttgtgaatgttggg
ggtactgggaccctgtcccagagctaccactatgaggtgtgtctgaccaatgattctggc
actggtgaatttaagttcttaaagccgattattcccagcctccccactcaggatagtgga
agagacttggaagaaagccctcctttacaggagagcttttggctgggttaa
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