KEGG   Phascolarctos cinereus (koala): 110220988
Entry
110220988         CDS       T05867                                 
Symbol
GTF2H1
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03022  Basal transcription factors
pcw03420  Nucleotide excision repair
pcw05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110220988 (GTF2H1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110220988 (GTF2H1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    110220988 (GTF2H1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcw03021]
    110220988 (GTF2H1)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110220988 (GTF2H1)
Transcription machinery [BR:pcw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110220988 (GTF2H1)
DNA repair and recombination proteins [BR:pcw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110220988 (GTF2H1)
SSDB
Motif
Pfam: PH_TFIIH BSD GeBP-like_C
Other DBs
NCBI-GeneID: 110220988
NCBI-ProteinID: XP_020860969
UniProt: A0A6P5LXN6
LinkDB
Position
Unknown
AA seq 548 aa
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNAVDSPAASNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKMDEKGLKTMVSLGVKNPLLDLTALEDKSLDEGYGVSPVPSTSNSSKSIKENS
NAAIIKRFNHHSAMVLAAGLRKHEAQNDHNNENSTDGNSRDSDFFQPPVKRVKLQESIEY
EDLGKNNSIKTIALSLKKSDRYYHGPTPIQSLQYATSQDIIXSFQSIKQEMETYTPKLTQ
VLSSGAASSTITALSPGGALMQGGPQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVRMKSNLERFQATKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLLKKT
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcaacttcatcagaagaagtcttactgattgtaaagaaggtgcgtcagaagaagcag
gatggggccttgtacctcatggcagaaaggatagcttgggcacctgaaggcaaagacagg
tttacaatcagccatatgtacgcggacattaaatgccagaaaatcagtccagaaggaaaa
gctaaaatccagcttcagctggtcctgcatgcaggagacacaaccaacttccatttttcc
aatgaaagcacagctgtaaaggagcgagatgctgtgaaagaccttcttcagcagttgcta
cccaaattcaagaggaaagccaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagacctggttgtgagtcaggtgatcagtgctgag
gaattctgggccaatcgtttaagcatgaatgctgtggatagccctgcggcatccaatcac
aagcaggatgtgggcatttctgcagcatttctggctgatgtccgcccccaaacagatggc
tgtaatggtctacgatataacttaacttctgatatcattgagtccatatttaggacctac
ccagcagtaaaaatgaaatatgcagaaaacgttccacataacatgacagaaaaagagttc
tggacacgattttttcaatcccattattttcatagggatcggcttaacacagggtcaaaa
gatctctttgcagaatgtgccaaaatggatgaaaagggtttgaaaacaatggtatcacta
ggagtgaaaaacccactgctagatttgacagcactggaggataaatcattagatgagggc
tatggggtttcccctgtgccatctacttccaactcttcgaagtccatcaaggagaatagc
aatgccgcgatcatcaagagatttaaccatcatagtgctatggtcctggcagcaggtctc
aggaaacatgaagcacaaaatgatcacaacaatgaaaacagcacagatgggaactctcgg
gattcagacttctttcagccaccagtcaaaagggtgaagttacaggaatccattgaatat
gaagacttggggaaaaataatagcataaaaacaattgcactaagcctgaagaagtcagat
agatattatcatggcccaactccaattcagtccctccaatatgcaacaagtcaagatatt
atcnattcttttcaaagtattaagcaagagatggaaacttacacacccaaactaactcag
gttctttcaagtggtgctgcaagtagtaccatcacagccctatcacctggaggagcactt
atgcagggaggaccgcagcaagccataaaccagatggtgccaaatgacattcagtcggaa
ctcaaacacttatatgtggccgtgggggagctgctgaggcacttctggtcctgttttcca
gttaacacaccattcctagaagaaaaggtagtgaggatgaagagtaatttggaacgattc
caagctactaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaagagatgctgcagacggcctacaataaacttcacacgtggcag
tcccggcgcctgctgaagaagacgtga

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