Phascolarctos cinereus (koala): 110221045
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Entry
110221045 CDS
T05867
Symbol
VPS16
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04140
Autophagy - animal
pcw04148
Efferocytosis
pcw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110221045 (VPS16)
04148 Efferocytosis
110221045 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110221045 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110221045 (VPS16)
Membrane trafficking [BR:
pcw04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110221045 (VPS16)
Hops complex
110221045 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
110221045
NCBI-ProteinID:
XP_020861066
UniProt:
A0A6P5LYC0
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MLQPDAHPYLSSTSEREKRSGRATWRWRRWRKLKFELYSMDWDLKEPLRDCLVAAAPYGG
PIAVLRNPWKKEKSPSIRPLLQIYSSSGVALASLLWKSGPVVLLGWSAEEELLCVQEDGS
VLVYGLHGDFRRHFSMGNEVLQNRVLDARVFHTEFGSGIAILTGAHRFTLTANVGDLKLR
RMPEVPGLQALPSCWTVLFQDRVTLVLLAIGPDLYLLDNTACSGVVPPGLAPGVSGFLQM
AVSFNYRYLALFTDTGHIWMGLASLKEKLYEFSCNIRAPPKQMAWCSRPKSKQKAVVVAW
ERRLMVAGDAPESIQFVLEEDSYLVPELDGVRIFSRNVHEFLHEVPVASEEIFRIASMAP
GALLLEAQKEYEAASFGKCFVDKFPPDTFVRMCQDLRVLNAVRDYPIGIPLTYTQYKQLT
IEVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQ
KLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESG
DTDLVFTVVLHLKNELNRGDFFMTLXNQPVALSLYRQFCKHQELETLKDLYNQDDNHQEL
GNFHMRASYAAEERIEGRVAALQTAADEYYKAKNEFAAKATEEQMRLLRLQRRLEDELGG
HFLDLSLHDTVTSLLLSGNNKRAEQLARDFRIPDKRFWWLKLTALADREDWEELEKFSKS
KKSPIGYLPFVEVCMKRRNKFEAKKFAARVSPEQKVKAFLLIGDVAQAADVAIEHRNEAE
LSLVLSHCTGASDGATADKIQRARALAQRK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcccgacgctcacccctatttatctagcaccagcgaaagagagaagagatcc
gggagggcaacctggaggtggaggagatggaggaagctgaagtttgagctgtacagcatg
gactgggacctgaaggaacccctgcgagactgcctggtggctgcagctccttatgggggc
cccattgctgtgttgagaaacccttggaagaaagagaagtcacccagcattcgaccatta
cttcagatttattcgtcctctggagtggctctagccagcttgctgtggaagagtgggccg
gtagtgttattgggctggtcggcagaggaggagctgctgtgtgtgcaggaagatggctct
gtgctggtctatgggctgcatggtgacttccggagacacttcagcatgggcaatgaggtg
ctccagaaccgggttctggatgcccgggtattccacacggagtttgggtcagggatcgcc
atcctcactggtgcccatcgttttacactcactgccaacgtgggtgacctcaagctgcgt
aggatgccagaggtgccagggctccaggctctaccttcatgctggacagttttgttccaa
gaccgagtgacccttgtgcttttagccattggtcctgacctctacctgttagacaataca
gcctgctcaggggtggtaccccctggtttggctccgggagtgagtggcttcctccagatg
gctgtgtccttcaattatcgatacctggcattattcactgatacgggccacatttggatg
ggcctggcttcacttaaggagaagctgtatgagttcagctgcaacattcgagccccgccc
aagcagatggcctggtgcagtcgtccaaagagcaagcaaaaggctgttgtggtggcctgg
gagcgacggcttatggtagctggtgatgcacctgaaagcatccagtttgtactagaagag
gattcatacctagtgcctgagctggatggagtccggatcttctcacgaaatgtccatgag
tttttgcatgaagttccagtggccagtgaagagatcttcaggattgcttctatggcccca
ggagcccttctgctagaagctcaaaaggaatatgaggcagcctcctttggaaagtgtttc
gttgacaagtttccaccagacaccttcgtgcgcatgtgtcaggacttgagggtgctgaat
gctgtgcgggactatcccattggaatccccctcacctacacccaatacaagcagctcact
attgaagttttgctggacaggctggtgttgcggcgactctatcctctggccatccagatc
tgcgagtaccttcgacttcctgaggttcagggtgtcagtcgcatcctggcccactgggcc
tgttacaaggtgcagcagaaggatgtgtctgatgaagatgttgctcgtgccattaaccag
aagcttggggatacgccaggggtctcctactccgatatcgccgcccgcgcctatggctgc
ggccgaactgagcttgccatcaagcttttggaatatgagccgcgatctggggagcaggtg
ccacttctgctgaagatgaagagaagcaaattggccctgagtaaagccattgagagtggg
gacacagacctagtgtttacagttgtattgcacctaaagaatgagctgaatcgtggagat
ttcttcatgaccctcnagaaccagcctgtggccctgagtctatatcgacagttctgtaag
caccaggagctggaaacactgaaggatctttacaaccaagatgacaatcaccaagagctt
ggcaacttccacatgcgggccagctatgctgctgaggagcggatcgaaggcagagttgca
gcccttcagactgcagctgatgagtactacaaggccaagaatgagtttgctgctaaggcc
acagaggagcagatgcggctcctgcggctgcagcggcgcctggaggatgagctggggggg
cacttcctggacctgtccttgcatgacaccgtgacttccctcctcctcagtgggaacaac
aaacgtgccgaacagctggcccgggacttccgaatccctgacaaaaggttctggtggtta
aagctgactgcattggctgatcgggaagactgggaagagctagaaaagttttccaaaagc
aaaaaatcacccattgggtatctgccctttgtggaagtgtgcatgaagcgacgcaacaaa
ttcgaggccaagaagtttgctgcccgagtgagccctgagcagaaagtcaaggctttcctc
cttatcggggatgtggcacaggctgcggatgtggccatcgagcatcgcaatgaggccgag
ctgagcctcgtcctgtcccactgcactggggcctcagacggagccacagctgacaaaatt
cagcgtgccagggccctggctcagaggaagtga
DBGET
integrated database retrieval system
