KEGG T05867: 110221199

Phascolarctos cinereus (koala): 110221199

Entry

110221199         CDS       T05867

Symbol

POLR2J

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a

K03008

DNA-directed RNA polymerase II subunit RPB11

Organism

pcw Phascolarctos cinereus (koala)

Pathway

pcw03020

RNA polymerase

pcw03420

Nucleotide excision repair

pcw05016

Huntington disease

Brite

KEGG Orthology (KO) [BR:pcw00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110221199 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110221199 (POLR2J)
09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    110221199 (POLR2J)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcw03021]
    110221199 (POLR2J)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110221199 (POLR2J)
Transcription machinery [BR:pcw03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     110221199 (POLR2J)
DNA repair and recombination proteins [BR:pcw03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110221199 (POLR2J)

SSDB

Motif

Pfam:

RNA_pol_L_2 RNA_pol_L SHNi-TPR

Other DBs

NCBI-GeneID:

110221199

NCBI-ProteinID:

XP_020861251

UniProt:

A0A6P5LYW8

LinkDB

Position

Unknown

AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE

NT seq 354 nt +upstreamnt +downstreamnt
atgaacgcgcccccggccttcgagtccttcctcctctttgagggagagaagaagatcact
atcaataaggacaccaaagtccccaatgcctgtttgttcaccatcaacaaggaggaccac
accctaggaaacatcatcaaatcacagctactgaaagacccacaggtgctgtttgcaggc
tataaagtcccccaccccctggaacacaaaatcatcattcgtgtgcagaccactccggac
tacagccctcaggaagctttcactaacgccatcacagatctgatcagcgagctctccttg
ttggaggagcgattccgggtcgctatcaaagacaaacaagaaggaattgaatag

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