Phascolarctos cinereus (koala): 110221251
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Entry
110221251 CDS
T05867
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110221251 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110221251 (VPS8)
Membrane trafficking [BR:
pcw04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110221251 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
zf-RING_Vps41
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_2
Clathrin
zf-RING_UBOX
EIF3I
Ima1_N
zf-C3H2C3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110221251
NCBI-ProteinID:
XP_020861351
UniProt:
A0A6P5LS82
LinkDB
All DBs
Position
Unknown
AA seq
1479 aa
AA seq
DB search
MASEVGPESEEAAPSPRGGFGEGLAQALEASLPRLSYLDLDKDVEFRNELIDDKEFDIPQ
VDTPPTLESILNETDDEDEPFVLEDPTLLNIDTFDTHSYDTSSVASSDSGDRTNLKRKKK
LLDSFSVHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSRLIAVGTSHGLALIFGKD
QNQALRLCLGSTSVGGQYGAISALSINHDCSRLLCGFAKGQMTMWDLASGKLLRSITDAH
PPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPL
HSKAELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAA
NNYVNPTLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSV
EKLHVIDRLTQEELETVEMSEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYG
GQIFYLGTKSVYVMTLRSWRERVDHLLKQECLTEALALAWSFHEGKAKAVVGLSGDASKR
KAIVADRMVEILFHCADRALKKCPDQGKIQVMEQHFQDTVPVVVDYCLRLQRRDLLFSQM
YDKFSENSVAKGVFLECLEPYILSDQLVGITAQVMKDLLIHFQDKKLMENVEALIVHMDI
TSLDIQQDFSGLVTAFRSRVICSFSQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFK
VIAPPLSAGKSLTDEQVIMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRL
HSAEASSEEEIYPYICTLLHFDTREFLNVLALTFEDFKNDKQALEYQQRIVDILLKVMVE
NSDFTPSQVGCLFTFLARQLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHAERQQVLLEL
LQAGGIVQFEESRLIRMAERAEFYQICEFMYEREHQYDRIIDCYLRDPLREEEVFNYIHN
ILSIPGHSPEEKQSVWQKAMLHIEELVALNPCKAAELVATHFSGQVEAIIHKLQNPFLLF
QFLRSLLDPRAVTHREIPRGMDEIDVTCHVLAKAPQCSREGISMNQESLQASPYITEQFI
DLLCQYNPHQVIDTLQVLESYRLEETIQITQKYQLLEVCAYLLEKKGDVHGAFLIMLERL
QSRLQEFTKESENVREDPSFKDVEEILVETIALCQRNSQSLNQQQREALWFPLLEAMMAP
QKLSSSSAPPRHAESLKSLTMQVLDSTAAFIALPSILQRILQDPVYGRGRLGEIQGLILG
MLDTFNYEQTLLETTTNLLNHDLHWSLCNLRASVTRGLNPKQDYCCICLQQYRRRQEVAD
DIVVFSCGHLYHSLCLLNKECTVGTGSQARWMCYRCNSSNKIGKLGENASDVKKGQLAQA
QVKTSPSCSSPRGDSAAKKKWLCSRSRRSSAEGVTSLHRSVCHTLTSHEALTLGDLAPLS
SRAPDWCCRPHQNQDWIPSRPRLSTSSAVFTGEPPGWRS
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaagtcggtcctgagagtgaagaggcggccccctcaccccgaggagggttt
ggggaaggcctggcccaggccctggaggcttcactccccagactctcctacctggacctg
gacaaggacgtggagttcagaaatgagctgatcgacgacaaggagtttgatatccctcag
gtggacacccctcccaccctagaaagcatactcaatgagaccgatgatgaagatgagccc
tttgttctggaggatcccactctgttaaatattgacacttttgacacccactcctatgac
acgtcatcagtggcaagctcagacagtggtgaccgaaccaatctgaaaaggaagaagaaa
cttcttgactctttttcagtccatggctcagtcatgcggcattcgcttctgaagggaatc
tcagcccagattgtctcggcagctgacaaagtcgatgctggtttgcccactgcaatagct
gtgtcccgtctgattgcagtgggaacttctcatggattggccttaatcttcggaaaagat
cagaaccaggccctgcgcctctgcctgggcagcaccagcgtcgggggacagtacggggcc
atctctgctctcagcatcaaccatgactgctcgagacttctctgtggctttgccaagggc
cagatgaccatgtgggacttggccagcgggaagctcttgagatccataacagatgctcac
cccccaggcacagcaattctgcacattaagtttacagatgacccgactcttgccatttgc
aatgacagcggaggttctgtgtttgagctgacatttaagcgagtgatgggagtgagaacc
tgtgaatcccggtgtctgttcagtgggtccaagggggaagtttgctgtatcgagcctctt
cattccaaggccgagctcaaggatcatcccatcactcagttttccttactggccatggca
tccttaactaaaatattggtcattggactgaaaccatctctgaaagtgtggatgactttt
ccctatggacggatggatccctccagtgtcccgctgctggcctggcattttgtggcagcc
aataattacgtgaaccccacattggccttttgcagaggagacgtcgttcactttctgttg
gttaaaagagatgaatcaggtgccatacacgtcactaaacaaaagcatctgcacctgtac
tatgacctcatcaacttcacttggatcaattctcgcacgatcgtgctcctggacagcgtg
gagaagctgcacgtgattgatcggctgacgcaggaggagctcgagacggtggaaatgtcc
gaggtgcagctggtctacaacagcagccatttcaagtccctggccacgggaggcaacgtc
agccaggccctggctcttgttggagagaaagcctgttatcagtccatcagtagttatggc
ggtcagatcttttatttagggacaaaatctgtttatgtgatgacgttgaggagctggaga
gagagagtggatcatctcctgaagcaagagtgtctgacagaggccctggctctcgcctgg
tctttccatgaagggaaggccaaagctgtcgttggcttgtcgggggatgcgagcaaacgg
aaggccattgttgccgatcggatggttgaaatcctcttccactgtgcagaccgagctttg
aaaaaatgcccagaccagggtaaaatccaggtgatggagcagcattttcaggacacggtg
ccagttgttgtcgattactgccttcggctgcagcgcagggatcttttatttagccagatg
tatgacaagttcagtgagaattccgtggccaagggggtcttcttggagtgcctggagcct
tacattttaagtgaccaactggtgggaatcacagcccaggtgatgaaggatttgctcatt
cacttccaagataaaaagctgatggaaaatgtggaggccctgatcgtgcatatggacatc
accagcctggacatacaacaggatttctctggcttggtcactgccttcagatccagggtc
atctgctccttttcgcaggtcgttctcatgtgctgggagaatcgcctctatgatgccatg
atctacgtctacaacaggggcatgaatgaattcatcagtccaatggagaaacttttcaag
gtcattgctcctcctctgagtgcaggaaagtctctgacagatgaacaggttattatgggc
aacaagcttctggtctacataagctgctgcctggcaggtcgtgcttatcccctgggggac
atccctgaagacctggtgcccttggttaaaaaccaggtctttgagtttctgatccgcctg
cattctgcggaggcctcctctgaggaagagatctacccctatatctgtactttgcttcac
ttcgataccagggaattcctgaacgtccttgccctgacttttgaagattttaaaaatgac
aagcaagctctggaataccagcagcggatcgtggacatcttgctgaaggtcatggtggaa
aattcagatttcactccttcccaagtcgggtgcctcttcaccttccttgcccgacagctc
gccaagcccgacaacacgctctttgtgaacaggacgctgtttgaccaggttctcgagttc
ctctgcagccctgatgacgactctcggcacgcggagaggcagcaggtcctcctcgaattg
ctccaggctggagggattgtgcagtttgaggagagccggctcatccggatggcagagaga
gccgagttctaccagatttgtgagtttatgtatgaacgagaacaccagtatgacaggatt
attgactgctacctccgggacccgctgagagaggaagaggtgtttaactacattcataac
atcctgtccattcctgggcacagcccagaggagaagcagtccgtgtggcagaaggccatg
ctgcacattgaggagcttgtggctctgaatccctgcaaggcagcagagctggtggccacc
cacttctctgggcaggttgaggccatcattcacaaactccagaatccatttctgcttttc
cagtttctgaggagcctgcttgacccgagggctgttactcacagggagattcccagagga
atggacgagatagatgtgacatgccacgtgttggcaaaagcaccgcagtgcagcagggaa
ggtatttccatgaaccaagagtcgctccaggcatctccttacatcacagagcagttcatt
gacttgttatgtcaatataaccctcaccaagtgattgacacactgcaagtcctcgagtcc
taccggctggaagagaccattcagattacccagaagtaccagctgcttgaagtgtgtgcc
tacctcttagagaagaaaggggatgttcacggtgctttcttaataatgcttgagagacta
caaagcagactccaggagtttacaaaggaaagtgaaaatgtgagagaggacccctcattc
aaggacgtggaagagatcttggtagagacaatcgccctgtgccaaaggaattcacagagt
ctgaaccagcaacagcgagaggctctctggtttccactgttggaggcaatgatggccccc
cagaagctgtccagctcgtccgctccacctcgacacgcagaatctctgaagtctctgacc
atgcaggtgctggacagcacggcggccttcatcgctctgccgtccatcttgcagcgaatc
ctccaagatccagtttatggaagaggaaggctcggcgagatccaaggactcatcctggga
atgctggacacctttaactacgaacaaacactcctggaaacgaccaccaacctcctgaac
cacgacctccactggtcactctgtaacctgagggcgtcggtcacccgagggttaaacccc
aagcaggattactgctgcatctgcctgcagcagtacaggcggcgccaggaggtagctgat
gacatcgtagtcttcagctgtggccacctctatcactccttgtgcctgctcaacaaagag
tgcaccgtggggacggggagccaggccaggtggatgtgctaccggtgcaattcaagcaac
aagatagggaagcttggtgagaacgcctctgatgtgaagaaaggacagctcgcccaggcg
caggtgaaaacgtctccttcctgctcttcaccccgaggagattctgctgccaaaaagaag
tggctttgcagcagaagcaggcgaagcagcgcagagggggtcacctcactccaccggtcc
gtgtgtcacacactaacaagccatgaagcgctgacacttggggacctcgcacctttgtct
tctcgggctcccgattggtgttgcagaccccatcagaaccaggactggatccccagcaga
cccaggctttcgaccagctctgccgtctttaccggggaacctccaggctggcgctcctga
DBGET
integrated database retrieval system
