KEGG   Phascolarctos cinereus (koala): 110221331
Entry
110221331         CDS       T05867                                 
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
  KO
K12024  tripartite motif-containing protein 50/73/74
Organism
pcw  Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcw04121]
    110221331 (TRIM50)
Ubiquitin system [BR:pcw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    110221331 (TRIM50)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-B_box zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 TRIM_CC zf-RING_2 zf-RING_5 Sina_RING RING_XB3-XBAT31 zf-RING_4 zf-Nse SSNA1 Prok-RING_4 zf-ANAPC11 U-box CRWN_second_CC zf-RING_6
Other DBs
NCBI-GeneID: 110221331
NCBI-ProteinID: XP_020861517
UniProt: A0A6P5LSM8
LinkDB
Position
Unknown
AA seq 488 aa
MALQVTAPDLANGLQCPVCLEVFKEPLMLQCGHSYCKDCLNSLTHHLGNQLFCPVCRQVV
PDGSSSPPNVSLAQVIEALHVPGEQELSVCTHHQNPLSLFCERDRELICGLCGLLGSHKQ
HQVIPVSTVYSRMKEELSGLISDLKQQREKLEEQVTRLGNNRTRIANESDVFSWVIRREF
QELHRLVDEEEARCLEGIECHKRGLLASMDIQLEQAQGARERLDQAEGVLEQLSEESHLD
FIQKYHAMASSTKLQQTLPLEGTFNAVSFKPGFHPANLKMTVWKRLFRKVLPAMETLKLD
PATAHPLLQLSKGNTVVECGLLSQRSVGHPDGFDYNTCVLASQGFSCGRHYWEVVVGSKS
HWRLGVIKGTANRKGKLIKSPEHGLWLIGLKEGRGYEAFQCPRVLLPVAGHPHRIGVYLH
YEQGELTFFDADRPEGLQPLYTFQADFQGKLYPILDTCWNERGNNSLPMVLPQPPGPGHL
PTLEHTKL
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgttgcaggtgacggcccctgatttggcaaatgggcttcaatgtcctgtttgtctg
gaggtctttaaggagcccctcatgctgcagtgtggtcattcttactgcaaagattgtctg
aactccttaacccaccacctgggaaaccagctcttctgccccgtgtgccggcaagtggta
cccgatggcagcagctccccgcccaatgtttccctggcccaggtgattgaagctctgcat
gtcccaggcgagcaggagctgagtgtctgtacccatcaccaaaacccactcagcctgttc
tgtgagagggacagagagctcatctgcggcctctgtggccttctgggctcccacaagcag
caccaggtcatacctgtctccactgtgtacagccgcatgaaggaggagctctcgggcctc
atctcggacctgaaacaacagcgggaaaaactggaggaacaggtcaccagactagggaac
aacaggacccggattgctaacgagtccgacgtcttcagctgggtgatccggagagagttc
caggagctccaccgcctggtggacgaggaggaggcccgctgtctggagggtatcgagtgt
cacaagcggggcctcctggcctccatggacatccagctggagcaggcccagggcgcccgg
gagcggctggaccaggcggagggagtcttggagcagctgagtgaggagagccaccttgac
ttcatccagaaataccatgccatggcctccagcacaaagctccagcagactctgccgctg
gagggaaccttcaacgccgtctctttcaagcctggcttccacccagccaatctcaaaatg
accgtgtggaagcggctgttccgcaaggttctgccagccatggagactctgaaattggac
ccagctacggcccacccgctcctccagctctccaaagggaacacagtggtagagtgtggc
ctcctgtctcagcggagtgtcggccaccctgacggctttgactacaacacctgtgtcctc
gccagtcaaggtttctcctgcggccgtcactactgggaggtggtggtgggcagcaagagt
cactggcggctgggggtcatcaagggcaccgccaaccggaaaggcaagctgatcaagtcc
cccgagcatgggctgtggctgatcgggctcaaggagggccgggggtatgaggccttccag
tgcccacgagtgctgctgcctgtggccggccaccctcatcgcatcggtgtgtatctccac
tatgaacagggggagctcactttctttgacgcagaccgccccgagggcctccagcccctg
tacactttccaggctgacttccaaggcaaactttaccccatcctggacacctgctggaat
gagcggggcaacaattcccttcccatggttctgcctcaacctccgggacctggccacctg
cccaccctggagcacaccaaactgtag

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