Phascolarctos cinereus (koala): 110221497 Help Entry 110221497         CDS       T05867                                  Symbol LIG3 Name (RefSeq) DNA ligase 3 isoform X1   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism pcw  Phascolarctos cinereus (koala) Pathway pcw03410   Base excision repair Brite KEGG Orthology (KO) [BR:pcw00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     110221497 (LIG3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pcw03400]     110221497 (LIG3) Enzymes [BR:pcw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      110221497 (LIG3) DNA repair and recombination proteins [BR:pcw03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      110221497 (LIG3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase Synaptonemal_3 DUF3802 mRNA_cap_enzyme Cytadhesin_P30 Motif Other DBs NCBI-GeneID:  110221497 NCBI-ProteinID:  XP_020861847 UniProt:  A0A6P5LTI3 LinkDB All DBs Position Unknown AA seq 1006 aa AA seqDB search MPLALAVLFQQTCRVLGRREVPHLLQEPLHWQFSSPFSSVSGASGFHGSWLLVKKRPCLW FKGDVPGPCTARFAFLPVSRVRFCTSASEMAEQRFCVDYAKRSTAGCRKCKEKIVKGVCR IGRVVPNPFSESGGDMKEWYHIKCMFEKLERARAATKKIEDLTELEGWEELQDTEKDQIS EHIAALSSKAASTPMKKATVQAKLTPTGQVISPRKGGSSVPNTNPRKFSGFTAKPSTSEE PLSNLTTKSTLSAGRCDPKHKDCLLREFRKLCAMVADKPSYNVKTQIIHDFLQKGSGGDG FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSQDDMIRDLEQGDVSETVRVFF EQSRSFPPAARSLLTIQEVDEFLLQLSKLTKEDDQQNVLQNIASRCTANDLKCIIRLIKH DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLANQQECEKAPGKKQTLSVQAALM TPVQPMLAEACKSIEYAMKKCPSGMFSEIKYDGERVQVHKKGDQFSYFSRSLKPVLPHKV AHFKDYIPQAFPGGQSMILDAEVLLIDTKTSRPLPFGTLGVHKKAAFQDANVCLFVFDCI YFNDVSLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIREGLEGLV LKDTKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDP SSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKINKNYYPDFIVPDPKK APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATTLPQLKELYQLSKEKADF TVVPADEGSSVTSGSSGENEGSSGPSTPRRASQASPSKAPAQAKKAERKMNGPPSKAGNK PTMRPSPGKVEERKGEKRKAPEEDTSQNKTLLDIFTGVRLYLPPSTQDFSQLRRYFVAFN GDLVQEFDTASATHVVGSGDKNPEAQQVSPEWIWACIRKRRLVAPC NT seq 3021 nt NT seq  +upstreamnt  +downstreamnt atgccgttggccttagctgtcctcttccagcagacttgcagagttcttggccgaagggaa gtaccacatttgctccaagagccattacattggcagttcagtagcccattctccagtgta tcaggagctagtggctttcatgggtcctggcttcttgtgaagaagaggccttgtctctgg ttcaagggggacgtcccaggaccatgtactgcccgttttgccttcctgccagtgtcacgt gtgagattctgcactagtgcttctgagatggctgaacagcgattctgcgtggactatgcc aagcgcagcacagctggctgcaggaaatgcaaggagaagatagtgaaaggtgtgtgccga ataggcagagtggtccccaaccccttctcagagtctgggggtgacatgaaggaatggtac catatcaagtgcatgtttgagaagctggaacgggcccgggctgccaccaagaagattgag gacctgacagaactggagggctgggaagaactgcaggacaccgagaaggaccagatcagt gagcacattgcagcgctctcctcaaaggcggcaagcacacccatgaagaaagccacggtc caggccaagctgacacccactggccaggtgatttctccacgcaaaggaggctcctcagtc cctaacaccaaccctcggaaattctctggtttcacagctaagccaagcacctctgaggaa cccctctcaaacctcacaaccaaatccaccctgtcagctgggaggtgtgacccaaagcac aaggactgcttgttgcgggagtttcggaagctgtgtgccatggtggccgacaagcccagc tacaatgtgaagacccagatcatccacgacttcctgcagaagggatcaggcggtgatggt ttccatggtgatgtgtacctgacagtgaagctactcctgccaggtgtcattaaaagtgtt tacaacctgaatgacaaacagattgtgaagcttttcagtcggatttttaactgcagtcag gatgacatgatccgggacttagagcagggagacgtgtcagagacagtgcgtgtgttcttc gagcaaagccgatccttccccccagcagccaggagcctcctcactatacaagaagtagat gagtttcttcttcagttgtctaaactcacaaaagaggatgaccagcaaaatgtgctacag aacattgcctccaggtgtactgccaacgacctgaagtgtatcatcagactcatcaagcat gacctcaagatgaattcaggtgccaagcacgtgttggatgccctggaccctaatgcctat gaagctttcaaagcctcaaggaacctccaggacgtggtagagcgtgtcctagcgaaccag caagagtgcgagaaggcaccgggcaagaagcagacactcagcgtccaggcagctctcatg accccggtgcagcccatgctggctgaggcctgcaaatccattgaatacgcaatgaagaag tgtcccagcgggatgttctccgagatcaagtatgatggggagcgggtgcaggtgcacaag aagggggatcagttcagctactttagccgaagcctcaagcctgtcctgcctcacaaagtg gcccatttcaaggactacatcccccaggcattcccagggggccagagcatgatcctcgat gctgaggtccttctgatcgacaccaaaacaagcagacctttgccttttgggactctgggt gtgcataagaaagctgctttccaggatgccaacgtgtgcttatttgtgtttgactgcatc tacttcaatgacgtcagcttgatggacaggccattgtgtgaacggcggaagtttctccat gacaacatggttgaaatccccaatcggatcctcttctctgaaatgaagcatgtcacaaaa gcatcagacttggcggatatgatcaaccgtgtcatccgggaagggctggaaggtttggtg ctaaaagatacgaagggcacctatgagccggggaagcggcactggctgaaagtgaagaag gactacctgaatgagggggccatggcagacacggcagatctggtggtcctgggggctttc tatgggcaagggaacaaaggtggcatgatgtccatcttcctcatgggctgctatgacccc agcagccagaagtggtgcacggtcaccaagtgtgctggaggccacgatgatgccaccctt gctcgcttgcagaatgagctagacatggtgaagatcagcaaggatcccagtaagattccc agctggctgaagatcaacaagaactactaccctgacttcattgtcccagatccaaagaaa gctcctgtttgggagatcacaggggcagaattctccaaggctgaggcccatacagccgat ggaatctctatccgtttcccccgctgtaccagaattcgtgatgataaagattggaagtct gccaccaccctcccacagctgaaggagctgtaccagctttccaaggaaaaagccgacttc actgtggtgcctgcagatgaggggagttctgtgactagtggcagcagtggagagaatgag ggcagctcaggcccttctacccctcgaagagcctcccaagcatcccccagtaaggcccct gcccaggccaaaaaggcagaaagaaagatgaacggtcccccaagtaaagcgggtaacaaa ccaaccatgagaccttcccctgggaaagtggaggagaggaaaggggaaaaaaggaaggca cctgaggaagacacaagccaaaacaagacgctgctggacatcttcacaggtgtgcggctt tatctgccgccctccacgcaggatttcagccagctccgccgctacttcgtggcatttaat ggagatctggtccaagagtttgacacagcctcggctacacatgtggtgggcagtggggac aagaaccctgaggcacagcaagtttcccctgaatggatctgggcatgtatccgaaaaagg agattggtggcgccgtgctag

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