Phascolarctos cinereus (koala): 110221538
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Entry
110221538 CDS
T05867
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110221538 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110221538 (MID1)
Enzymes [BR:
pcw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110221538 (MID1)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110221538 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
TRIM_CC
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
110221538
NCBI-ProteinID:
XP_020861904
UniProt:
A0A6P5M090
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNAMTSSEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNSPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWVLCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHL
DCLDQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattggagtcggaactgacctgccctatctgtctggagctgtttgaagaccca
ctcctgctgccctgtgcccacagcctgtgtttcaactgcgcccatcgcatcctagtctcc
cactgcgccaccaacgaatctgtagaatccatcactgccttccagtgccctacttgtcgg
tatgtcatcaccctcagccagagaggtctagagggactcaagcgtaacgtcaccctgcaa
aacatcatcgacaggtttcagaaggcttccgtcagtgggcccaattctcccagtgagacc
cgccgggagcgggcctttgatagcaacgccatgacctccagtgagaaagttctctgtcag
ttctgtgaccaggaccctgcacaggatgctgtgaaaacctgtgtcacttgtgaagtgtcc
tactgtgaggagtgcctgaaagcaactcacccgaataagaagcccttcacaggccaccgt
ctcattgagccaattccagactctcacatcagaggactgatgtgcctagagcatgaggat
gagaaggtgaatatgtactgtgtgacagacgaccaactgatctgtgccttatgtaaactg
gttgggcgacatcgggatcatcaggtggctgctttgagcgagcgctatgacaagttgaag
caaaacttagagagtaacctcaccaaccttattaagaggaatactgaactggaaacactt
ttggctaaactcattcaaacttgtcagcatgttgaggtcaatgcatcacgacaagaaacc
aaactgatggaggaatgtgacctactcattgaaatcatccaacagagacgccaaattatt
ggaaccaaaatcaaagaagggaaggtggtgagacttcgaaaattggcccagcagattgca
aactgcaaacaatgcattgaacgctctacatcactcatctcccaagccgaacagtccctg
aaggagaatgatcatgcccgattcttacagacagctaaaaatatcactgaaagggtctcc
atggcaactgcatcttcccaggttctaattcctgaaattaacctcaatgacacttttgat
accttcgcattagatttttccagagagaagaaattactagaatgtctggattaccttaca
gctcccaactctccaacaattagagaagagctctgtactgcttcgtacgacaccatcact
gtgcactggacctctgatgatgaatttagtgtggtttcatatgagcttcagtatactatc
tttactggacaagctaatgttgttagtttgtgtaactctgccgacagctggatgattgtg
cccaacatcaaacaaaaccactacacagttcacgggctccagagcggcaccaagtacatc
ttcatcgtcaaagctattaatcaggctggcagtcggaatagtgagcccggcaaattgaag
acaaacagccagccatttaaattggaccccaaatctgcccaccgaaaactaaaggtgtcc
catgacaacttgacagtagaacgtgatgaaacatcatcaaaaaagagtcacacacctgag
cgcttcactagccaagggagctatggagtagcaggcaatgtgttcattgatagtgggcgt
cattactgggaagtagtcataagtggaagtacatggtatgcaattggtcttgcttacaag
tcagccccaaagcatgagtggattggaaagaattctgcttcgtgggtgctctgccgctgc
aataataattgggtggtgagacataatagcaaggaaattcccatagaaccagcaccgcac
ctccggcgtgtgggcattttgctagactatgataatggctccatcgccttttatgatgct
ttgaactcccttcacctttatacatttgacattacatttgcacagccagtgtgtcctacc
ttcactgtgtggaataaatgtttgacaattataacaggccttcccatcccagaccacttg
gactgccttgatcagctgccctga
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