Phascolarctos cinereus (koala): 110221712
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Entry
110221712 CDS
T05867
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110221712 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcw01009
]
110221712 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcw04515
]
110221712 (PCDH20)
Protein phosphatases and associated proteins [BR:
pcw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110221712 (PCDH20)
Cell adhesion molecules [BR:
pcw04515
]
Cadherins
Protocadherins
110221712 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
CbtA
Motif
Other DBs
NCBI-GeneID:
110221712
NCBI-ProteinID:
XP_020862073
UniProt:
A0A6P5LXU1
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MTAVSLGMNCPGNERRSRTLGVSWLPGNRQQPLDMGHLYSPRSSTSRGNLPHLLLFFLFV
GPFNCFASYSRATELFYSLNEGLPAGVLIGSLAEDLQLVPQAASAEAAVAAGSEEDQQLH
QHHHHGEEWDPPLSFSLASQGLGGQYVTLDNRSGELHTSELEIDREALCLEGGGGGEGGG
RNGISVSSSPSSESCVLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVNQIAVSVPEN
APVNTRLAIEHPALDPDVGTNGVQTYRLLDYHGVFTLDVEENENGERTPYLIVMGALDRE
TQDQYVTIIIAEDGGSPPLTGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPVAG
VQAVDRDLGANAQITYSYSQKVPQVSKDLFHLDEITGVIKLFKKIGGNVLRLHKLTILAN
GPGCIPAVITVMVTIIKVVFRPPEIVPRYIANEVEGVVYLKELEPINTPVAFFTIRDPED
KYKVNCYLDGDGPFRLSPYQPYNNEYLLETAKSLDYETQQLYEITVVAWNSEGFHVKKVI
KIQILDDNDNAPVFTQPLIELSIEENNAPNAFLTKLHAIDADSGERGQVSYFLGPDAPSY
FLLDKITGILTVSTQLDREEKEKYRYTVKAVDSGIPPRESIATVAITVLDKNDNSPRFIN
KDFSFFVPENFPGFGEIGVISVTDADAGRNGWVALSVMNQSDIFVIDTGKGMLRAKVSLD
REQQSSYILWVEAVDGGEPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPG
SPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEETLMQNDYGLYRLL
VKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPEISIEEKEPQIAIEPTHRKV
ESASCVPTLVALSVISLGSITLVTGMGIYICLRKGKKHHRENDNLEVQIPLKGKLDLHMT
ERKPMEISNI
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtttcactgggaatgaactgcccagggaatgagaggcgctcacgaacccta
ggagtcagctggctaccggggaacaggcagcagcctctggatatggggcatctctacagt
cccaggagcagcaccagtcgggggaacctgccgcatctgttactgtttttcctcttcgtg
ggacctttcaactgcttcgcaagttacagtcgagccacggagctcttctacagcctgaac
gaggggctaccggcaggagtgcttatcggaagcctggctgaggacctgcagctggtcccc
caggcagcatcagcagaagcggcagtggcagcagggagtgaggaagaccagcagttacac
cagcaccaccaccacggagaggagtgggacccccctctttccttcagtttggcgtcccag
gggctgggtggtcagtatgtgaccctagacaaccgttcaggggagctgcacacttctgag
ctggagatcgaccgggaggcactgtgtcttgaaggaggtgggggaggggaagggggaggg
aggaatggcatctcagtctcctcctcaccttcctcagaatcttgtgtcttgctcctggac
gtgctggtcctgcctcaggaatacttcagatttgtgaaagtgaaaattgccatccgggac
atcaatgataacgctcctcagttccctgtgaaccaaatcgctgtatcagttcctgaaaat
gcacctgtcaacacccgattggccattgaacatccagccctggacccagatgtaggcact
aatggggttcagacctatcgcctcttggactatcatggtgtctttaccttggatgttgag
gagaatgagaatggagagcgcaccccatacctaattgtcatgggggcattagacagggag
actcaagaccagtatgtaaccatcattatagcagaagatggtggctctccacctctcacg
ggcagtgccactctcacgattggcatcagtgatattaatgacaattgtccccttttcaca
gactcacagatcaatgtaactgtgtatggaaatgctacagtgggcactcctgtggcaggt
gtccaagctgtggatagagacctaggtgctaatgctcagatcacctactcttacagccag
aaggttccacaggtatcaaaagacttattccacctggatgaaatcactggagtcattaaa
ctcttcaaaaagattgggggcaatgttctccgactacataagctcactatacttgccaat
ggaccaggctgcattccagctgtaatcactgttatggtgaccatcatcaaagtagttttt
cgtccacctgagatagttcctcgttatattgctaatgaagttgagggagttgtttactta
aaggagctagaacccatcaataccccagttgcattttttactatcagagacccagaagat
aaatataaggtgaattgctacctggatggagatggaccattcagattatctccctatcaa
ccatacaataatgaatacttgttagaaactgcaaagtctttggactatgagacacaacag
ctctatgaaataactgtggtggcctggaactctgagggatttcatgttaaaaaggtaatt
aaaatacagattctagatgacaatgacaatgcacccgttttcactcaaccactgatagaa
ctatctattgaagaaaataatgcaccaaatgcctttctaacaaagttgcatgccatagat
gctgacagtggagagagaggtcaagtttcttatttccttggacctgatgcaccttcatac
tttttgttagacaagattacagggattctgactgtgtccactcaactggacagagaagaa
aaagagaagtacaggtacacagtaaaagcagttgactctgggataccacctcgagagtca
atagctacagttgccatcactgtgttggataaaaatgacaatagccctaggtttatcaac
aaggatttcagcttttttgtgccagaaaatttcccagggtttggtgaaattggagtaatc
agtgtcacagatgcagatgcaggacgaaatggatgggttgccctttctgtgatgaaccag
agtgatatttttgtcatagacactggaaaaggcatgttgagagcaaaagtctctcttgat
agggagcaacaaagttcctatattttgtgggttgaagctgtagatgggggtgaacctgcc
ctctcctctactgcaaaaataacaattcttcttcttgacatcaatgacaaccctcctctt
gtcctgtttcctcagtcaaatatgtcttacctattggtcctaccttctactctacctggc
tcaccagttacagaagtctatgccgttgacaaagatactggtatgaatgctgtcatagct
tatagcatcataggaagaagaggtcctcggcctgaatcctttaggatagatcccaaaact
ggtaacattactttggaagagacattgatgcagaatgattatgggctctaccgtttgctg
gttaaagtgagtgaccatggctaccctgagcccctccattctaccgtcatggtaaatcta
tttgtcaatgataccgttagcaatgagagctacattgagagtctattgcgaaaagaacct
gagatcagcattgaggaaaaagaaccacaaattgcaatagaacctactcaccgaaaagtg
gaatcagcatcttgtgtgcccactttagttgccctgtctgtgataagtttggggtccatc
acattagtcactgggatgggaatatacatatgcctaaggaaggggaaaaagcatcaccgg
gaaaatgacaatttggaagtacaaattccactgaaaggaaagcttgatttacatatgaca
gagaggaaaccaatggagatttctaatatttga
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integrated database retrieval system