KEGG   Phascolarctos cinereus (koala): 110221712
Entry
110221712         CDS       T05867                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    110221712 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcw01009]
    110221712 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pcw04515]
    110221712 (PCDH20)
Protein phosphatases and associated proteins [BR:pcw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110221712 (PCDH20)
Cell adhesion molecules [BR:pcw04515]
 Cadherins
  Protocadherins
   110221712 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2 CbtA
Other DBs
NCBI-GeneID: 110221712
NCBI-ProteinID: XP_020862073
UniProt: A0A6P5LXU1
LinkDB
Position
Unknown
AA seq 970 aa
MTAVSLGMNCPGNERRSRTLGVSWLPGNRQQPLDMGHLYSPRSSTSRGNLPHLLLFFLFV
GPFNCFASYSRATELFYSLNEGLPAGVLIGSLAEDLQLVPQAASAEAAVAAGSEEDQQLH
QHHHHGEEWDPPLSFSLASQGLGGQYVTLDNRSGELHTSELEIDREALCLEGGGGGEGGG
RNGISVSSSPSSESCVLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVNQIAVSVPEN
APVNTRLAIEHPALDPDVGTNGVQTYRLLDYHGVFTLDVEENENGERTPYLIVMGALDRE
TQDQYVTIIIAEDGGSPPLTGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPVAG
VQAVDRDLGANAQITYSYSQKVPQVSKDLFHLDEITGVIKLFKKIGGNVLRLHKLTILAN
GPGCIPAVITVMVTIIKVVFRPPEIVPRYIANEVEGVVYLKELEPINTPVAFFTIRDPED
KYKVNCYLDGDGPFRLSPYQPYNNEYLLETAKSLDYETQQLYEITVVAWNSEGFHVKKVI
KIQILDDNDNAPVFTQPLIELSIEENNAPNAFLTKLHAIDADSGERGQVSYFLGPDAPSY
FLLDKITGILTVSTQLDREEKEKYRYTVKAVDSGIPPRESIATVAITVLDKNDNSPRFIN
KDFSFFVPENFPGFGEIGVISVTDADAGRNGWVALSVMNQSDIFVIDTGKGMLRAKVSLD
REQQSSYILWVEAVDGGEPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPG
SPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEETLMQNDYGLYRLL
VKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPEISIEEKEPQIAIEPTHRKV
ESASCVPTLVALSVISLGSITLVTGMGIYICLRKGKKHHRENDNLEVQIPLKGKLDLHMT
ERKPMEISNI
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgactgcagtttcactgggaatgaactgcccagggaatgagaggcgctcacgaacccta
ggagtcagctggctaccggggaacaggcagcagcctctggatatggggcatctctacagt
cccaggagcagcaccagtcgggggaacctgccgcatctgttactgtttttcctcttcgtg
ggacctttcaactgcttcgcaagttacagtcgagccacggagctcttctacagcctgaac
gaggggctaccggcaggagtgcttatcggaagcctggctgaggacctgcagctggtcccc
caggcagcatcagcagaagcggcagtggcagcagggagtgaggaagaccagcagttacac
cagcaccaccaccacggagaggagtgggacccccctctttccttcagtttggcgtcccag
gggctgggtggtcagtatgtgaccctagacaaccgttcaggggagctgcacacttctgag
ctggagatcgaccgggaggcactgtgtcttgaaggaggtgggggaggggaagggggaggg
aggaatggcatctcagtctcctcctcaccttcctcagaatcttgtgtcttgctcctggac
gtgctggtcctgcctcaggaatacttcagatttgtgaaagtgaaaattgccatccgggac
atcaatgataacgctcctcagttccctgtgaaccaaatcgctgtatcagttcctgaaaat
gcacctgtcaacacccgattggccattgaacatccagccctggacccagatgtaggcact
aatggggttcagacctatcgcctcttggactatcatggtgtctttaccttggatgttgag
gagaatgagaatggagagcgcaccccatacctaattgtcatgggggcattagacagggag
actcaagaccagtatgtaaccatcattatagcagaagatggtggctctccacctctcacg
ggcagtgccactctcacgattggcatcagtgatattaatgacaattgtccccttttcaca
gactcacagatcaatgtaactgtgtatggaaatgctacagtgggcactcctgtggcaggt
gtccaagctgtggatagagacctaggtgctaatgctcagatcacctactcttacagccag
aaggttccacaggtatcaaaagacttattccacctggatgaaatcactggagtcattaaa
ctcttcaaaaagattgggggcaatgttctccgactacataagctcactatacttgccaat
ggaccaggctgcattccagctgtaatcactgttatggtgaccatcatcaaagtagttttt
cgtccacctgagatagttcctcgttatattgctaatgaagttgagggagttgtttactta
aaggagctagaacccatcaataccccagttgcattttttactatcagagacccagaagat
aaatataaggtgaattgctacctggatggagatggaccattcagattatctccctatcaa
ccatacaataatgaatacttgttagaaactgcaaagtctttggactatgagacacaacag
ctctatgaaataactgtggtggcctggaactctgagggatttcatgttaaaaaggtaatt
aaaatacagattctagatgacaatgacaatgcacccgttttcactcaaccactgatagaa
ctatctattgaagaaaataatgcaccaaatgcctttctaacaaagttgcatgccatagat
gctgacagtggagagagaggtcaagtttcttatttccttggacctgatgcaccttcatac
tttttgttagacaagattacagggattctgactgtgtccactcaactggacagagaagaa
aaagagaagtacaggtacacagtaaaagcagttgactctgggataccacctcgagagtca
atagctacagttgccatcactgtgttggataaaaatgacaatagccctaggtttatcaac
aaggatttcagcttttttgtgccagaaaatttcccagggtttggtgaaattggagtaatc
agtgtcacagatgcagatgcaggacgaaatggatgggttgccctttctgtgatgaaccag
agtgatatttttgtcatagacactggaaaaggcatgttgagagcaaaagtctctcttgat
agggagcaacaaagttcctatattttgtgggttgaagctgtagatgggggtgaacctgcc
ctctcctctactgcaaaaataacaattcttcttcttgacatcaatgacaaccctcctctt
gtcctgtttcctcagtcaaatatgtcttacctattggtcctaccttctactctacctggc
tcaccagttacagaagtctatgccgttgacaaagatactggtatgaatgctgtcatagct
tatagcatcataggaagaagaggtcctcggcctgaatcctttaggatagatcccaaaact
ggtaacattactttggaagagacattgatgcagaatgattatgggctctaccgtttgctg
gttaaagtgagtgaccatggctaccctgagcccctccattctaccgtcatggtaaatcta
tttgtcaatgataccgttagcaatgagagctacattgagagtctattgcgaaaagaacct
gagatcagcattgaggaaaaagaaccacaaattgcaatagaacctactcaccgaaaagtg
gaatcagcatcttgtgtgcccactttagttgccctgtctgtgataagtttggggtccatc
acattagtcactgggatgggaatatacatatgcctaaggaaggggaaaaagcatcaccgg
gaaaatgacaatttggaagtacaaattccactgaaaggaaagcttgatttacatatgaca
gagaggaaaccaatggagatttctaatatttga

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