Phascolarctos cinereus (koala): 110221875
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Entry
110221875 CDS
T05867
Symbol
ATXN2L
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like protein
KO
K23625
ataxin 2/2L
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw05014
Amyotrophic lateral sclerosis
pcw05017
Spinocerebellar ataxia
pcw05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110221875 (ATXN2L)
05017 Spinocerebellar ataxia
110221875 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
110221875 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110221875 (ATXN2L)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110221875 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
LSM14
Motif
Other DBs
NCBI-GeneID:
110221875
NCBI-ProteinID:
XP_020862208
UniProt:
A0A6P5LY42
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MLKPQPPQPSQPQQTPIQQPAPARRPPGGTSPPNGSLGGTPASTSAPGPPTAASPGLGPP
AXGSGIRRGGEGVLPPQPPTHQLQERPGGAATGGTRGQSTGKGPPPSPVFEGVYNNSRML
HFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMV
FKSSDVMMVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDGNSDDYDLE
SDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIE
SSPQYRLRIAMENDDGRTEEEKHSSVQRQGSGRDSPSLVSREGKYIPLPQRMREGGPRGG
VRCSSSRGGRPGIGSLPPRGGPHHPDSSGPSPGPEPRGINGGPSRMSPKAQRPLRGAKTM
SSPSSRPPGETSVPSTTVGRMYPPRSPKSAAPAPASASCPEPPVGSSVPTSTASIPPVSS
AMEPGAGPISPTSPKVTAPNDGKELPQKEPGRTLEPPELARIAGKAPGLQNEQKRYQLEE
LKKFGAQFKLQSSSSPETSLDPFSPRGPKEGGVEAKGKEKEVEGLLAPEPLVSSGSSKTE
SPPDKEEKLSLPSTGGSEGPEQSQTPRQNQMGSPPGGISKGDDKEEGPVTDQVKKSTLNP
NAKEFNPSKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGMYSPQYISYIPQIHMGP
AVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPIMQAAAAAGPPLVAA
TPYSSYISYNPQQFPGQPTMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQ
YPPAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQP
PHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGFTNM
AHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGGVPQSGVPALSASTPSP
YTYIGHHQAALLGFDSKGTSCLTQDKLIT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccgcagccgcctcagccatctcagccccagcagacacccatccagcaaccg
gcaccagcacgccggcctcccggggggaccagcccccccaacggaagcctcggggggacc
ccagcctccacctcggccccggggccacccaccgccgcttccccgggcctagggcctcct
gcgngaggcagtgggatccgccggggaggtgagggggttctgccgccacagccgccaaca
catcagcttcaggagcggcccgggggcgctgctactggcggtaccaggggacagagcaca
ggaaaggggcccccaccatcacctgtatttgagggtgtctacaataattctaggatgctg
cacttccttactgctgttgtgggttccacttgtgatgtaaaggtgaaaaatggtaccaca
tatgaaggtattttcaagactctgagttcaaagtttgaactagcagtggatgcggttcat
aggaaggcttctgagccagcaggtggtccccgtcgagaggatattgtggataccatggtg
tttaagtcaagtgatgtgatgatggttcacttccgaaacgttgacttcaattatgccact
aaggacaagttcacagactctgccattgccatgaactcaaaggtgaatggtgaacacaag
gagaaggtgctacagcgctgggaagggggtgatggcaacagtgatgactatgaccttgaa
tctgatatgtctaatggatgggaccccaatgaaatgttcaagttcaatgaggaaaactat
ggagtaaaaacaacttatgacagtagcctctcttcttatacggtccccctggagaaggac
aactcagaggagtttcgtcagcgagagctccgtgcagcccaactggcccgagaaatagag
tccagtccccagtaccgtttacgtattgctatggagaatgatgatggacggacagaggag
gagaagcatagctctgtgcagcgacagggctcaggtcgtgatagtcccagtttagtgtcc
agggaagggaagtatatccctctgccccagagaatgcgagagggaggcccccgaggagga
gttcgatgcagcagctccaggggaggtcgacctggcattggttccttgccccctcggggt
ggcccccaccaccctgacagcagtggtcccagtcctggtcctgagccccgtggcatcaat
ggaggtccttcccgcatgtccccaaaagcccagaggcctcttagaggtgcaaagaccatg
tcttcccctagcagccgaccccctggagaaacctctgtcccatctaccacagttggtcgg
atgtatcccccacgttcccctaagtcagctgctcctgccccagcctcagcttcctgtcct
gagccacctgtaggctcttcagttcccacctctacagcctctattcctccagtttcgtca
gctatggaacctggagctggtcccatttccccaacctccccaaaggttacagctcctaat
gatggaaaagaactaccccaaaaggaacctgggagaactctggagccaccagagctagcc
cgaatagctgggaaagcccctggccttcagaatgaacaaaaacgttaccagttggaagaa
ctgaagaaatttggggctcagtttaagctgcagtccagcagttctcctgagaccagcctg
gaccctttctccccccgaggacccaaggagggtggggtggaagccaaaggaaaggaaaag
gaggtggagggtcttctggctccagagcctctggtgtcctctggctcctccaaaacagaa
tctccacctgataaggaggaaaaactgtctcttccctcgacaggagggtctgaaggacca
gagcaatcccaaacacctcgacagaaccaaatgggcagtcctcctgggggcatcagcaag
ggggatgacaaggaagaggggcctgtcactgatcaagtgaagaagtcgacactgaacccc
aatgccaaggagttcaacccttcaaaacctctgttgtctgtgaacaagtcaaccagcacc
ccaacttccccaggtccccggactcattcaactccttcaatcccagtgctgacagcaggc
cagagtgggatgtatagcccccagtacatctcctatatacctcagatccacatggggcca
gccgtgcaggctcctcagatgtacccataccctgtatctaactctgtgcctggtcagcag
ggcaagtaccggggagctaaaggttccttgcctccccaacgctcagatcagcaccagcca
gcctcagcaccccctattatgcaggcggcggcagctgcagggccccctttggtggcagcc
acaccatattcttcctatatctcctacaatccccagcagttcccaggccagcctaccatg
atgcagcccatggcccattatccctcacagcctgtctttgccccaatgcttcagagtaac
ccaaggatgctgacgtcaggcagccacccccaggccatagtctcatcttctactcctcaa
taccctccagcagagcagcccactccccaagccctttatgccacagttcaccagtcctat
ccacaccacgccacgcagctccatgcccaccagccgcagccagccaccacccctactggg
agccagccgcagtcccagcatgcggcccccagccctgtccagcatcaggcagggcagccg
ccacacttgggtagtgggcagccacaacagaacttgtaccatccaggtgccttaacaggc
acaccaccatctctgccaccgggaccttctgcccagtcccctcagagcagcttccctcag
ccagctgcagtctatgccatccatgcccaccagcagctaccccatggcttcaccaatatg
gcccatgtcacccaggcccatgtccagactggaatcacagcagccccaccccctcatcct
ggggctccccacccaccccaggtgatgctgctgcacccaccccagagccatgggggtcca
cctcaggggggtgtgccccagagtggtgtgcctgctctttctgcttccacaccttcaccc
tacacctacatcggacaccaccaagcagccctgcttggcttcgactccaagggaacatca
tgcctcactcaggataagctgatcacctga
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