Phascolarctos cinereus (koala): 110222125
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Entry
110222125 CDS
T05867
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03030
DNA replication
pcw03420
Nucleotide excision repair
pcw03430
Mismatch repair
pcw03440
Homologous recombination
pcw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110222125 (RPA1)
03420 Nucleotide excision repair
110222125 (RPA1)
03430 Mismatch repair
110222125 (RPA1)
03440 Homologous recombination
110222125 (RPA1)
03460 Fanconi anemia pathway
110222125 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcw03000
]
110222125 (RPA1)
03032 DNA replication proteins [BR:
pcw03032
]
110222125 (RPA1)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110222125 (RPA1)
Transcription factors [BR:
pcw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110222125 (RPA1)
DNA replication proteins [BR:
pcw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110222125 (RPA1)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110222125 (RPA1)
MMR (mismatch excision repair)
110222125 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
110222125 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
110222125
NCBI-ProteinID:
XP_020862638
UniProt:
A0A6P5LZ86
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSGRLSEGAIELIMQQGDTTIKPILQVISIRPIATGNSAPRYRMLMSDGVNTVSSFMLAT
QLNGLVEEERLASNCICRVNRFIVNVLKFGRKVVILMDLEVLQSADEVGGKLGNPVPYNE
GQGQQQQAAAAPGPAANAVAPRPQQQNGSSGLGSTATKSYGVSKTFGKVGSTNLSTPGGS
QLKVVPIASLNPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIEMVDESGEIRATAFND
QVDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVVLCEDAHHLPTVQF
DFTVIGDLESKAKDSLVDIIGVCKSYEDASKVIVKSSNREVSKRNIHLMDTSGKAVTTTL
WGEDADRFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTILVNPDIPEAFKLRGWFDSEGQ
ALEAVSISDARGGGTGGSNANWKTLYDVKSENLGQGDKADYFSCVATVVYLRKENCMYQA
CPSQDCNKKVIDQQNGLYRCEKCDREFPSFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKDKNEQAFEEVFQNANFRSYTFKIRVKLETYNDESRIKASVVDVKPVDYR
EYGKRLIMHIRKNAAVRQM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacgcctgagcgagggggccattgagctcataatgcaacaaggagatactact
ataaaacccatactccaagtcattagcatccggccaattgcgacgggaaattctgcgccc
cgttatcgaatgctcatgagtgatggagtgaataccgtatcctctttcatgttggcaacc
cagctgaatggcctggtggaggaagagcgcttggcaagcaattgcatttgccgggttaac
cgcttcattgttaatgtcctgaaatttggaaggaaagtggttatattgatggatttagaa
gttttgcaatctgctgatgaagttggaggaaagcttggtaacccggtgccctataatgaa
ggacaagggcagcagcagcaagcagcagcagctccagggccagcagctaatgcagtagcc
cccaggccccagcagcagaatgggagttcaggactgggttccacggcaactaagagctac
ggtgtttcaaagacatttggtaaagttggaagcactaatctgagcactcccggaggatcc
cagttgaaagtcgtgcccatcgccagcctcaacccataccagtccaagtggactatttgt
gctcgtgttactaataaaagtcagatccgcacctggagcaactctcgaggggaaggaaag
cttttctctatagaaatggttgatgaaagtggtgagatcagagctactgctttcaatgat
caagtagacaagttctttcccctcattgatgtgaataaggtgtattacttctccaaaggc
accctgaagattgctaataagcagtttacggctgttaagaatgactacgaaatgaccttc
aataatgagacctctgttgtgctttgtgaagatgctcatcacttacctacagttcagttc
gacttcacggtgattggtgacctggagagcaaggctaaagactcacttgtagacataatt
ggagtctgtaagagctatgaagatgccagcaaagtcatcgtgaagtcttccaacagagaa
gtttcgaagaggaacatccatttgatggacacgtcagggaaggcggtgacaacaactctg
tggggagaagatgccgacagattcgatggttctcggcagcctgtgctggctatcaaagga
gcccgagtctctgattttggtgggcggagcctctctgtgctatcttcaagcacaatcctt
gtgaaccctgatattccagaagcctttaagctccgtggatggtttgactcagaaggacag
gccttagaagctgtttcgatctctgatgccaggggtggaggaacgggagggagtaatgcc
aactggaaaactttgtatgacgttaagtctgagaacctgggacaaggtgacaaggcggat
tacttcagttgtgtggcaactgtggtgtatcttcgaaaggagaactgtatgtaccaggcc
tgtccctctcaagattgcaataagaaagtgatagaccagcagaatggactctaccgctgt
gagaagtgtgatcgtgaatttcccagctttaagtaccggatgatcctgtcggtcaatatt
gcagatttccaggagaatcagtgggtaacttgtttccaggaatctgcagaggctatcctt
ggacagaatgctgcgtatctcggggaattaaaagacaagaatgagcaggcgttcgaggaa
gtcttccagaatgccaactttcgttcctacacattcaagattagagtcaaactggagact
tacaacgacgagtctcgaatcaaggcctctgtagtagacgtgaagcctgtggactacaga
gaatatggcaagaggctcatcatgcacatcaggaagaacgccgctgttcggcagatgtga
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