Phascolarctos cinereus (koala): 110222189
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Entry
110222189 CDS
T05867
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110222189 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110222189 (PRPF8)
Spliceosome [BR:
pcw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110222189 (PRPF8)
Complex C
U5 SnRNP specific factors
110222189 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110222189
NCBI-ProteinID:
XP_020862728
UniProt:
A0A6P5LZG8
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGTPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLRTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQASWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccctacagagggccaggtacccctgtgcctggccctctggcacca
ctgcccgactacatgtcagaggagaagcttcaggaaaaagcccggaaatggcagcagtta
caggcaaagcgctatgcagagaagcggaaatttggatttgtagatgcacagaaggaagac
atgcccccggagcatgtcaggaagatcatccgtgaccatggggacatgaccaaccggaaa
ttccgtcatgacaagcgagtctacctgggtgccctgaagtacatgcctcatgctgtcctc
aagctcttggaaaacatgcccatgccctgggagcagattcgggacgtgcctgtgctctac
cacatcactggggcgatttcctttgtcaatgagattccctgggtcattgagcctgtctac
atctctcagtgggggtccatgtggatcatgatgcgtcgagagaagagggacaggcggcac
ttcaagcgcatgcgttttcccccgtttgatgatgaggagccacccctggactacgcggac
aacatcctagacgtggagcctttggaggccatccagctggaactggaccctgaggaggat
gcccccgtgctggactggttttatgaccaccagcccctaagggacagcaggaagtacgta
aatggctctacttatcagcgctggcaattcacactgcccatgatgtcgactctctaccgc
ctggccaatcagctcctaactgaccttgtggatgacaactacttctatctgtttgacctg
aaggcctttttcacctcaaaagccctcaatatggccatcccagggggcccgaaatttgaa
ccactagtccgagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aagatcatcatcaggcagcccatcagaaccgaatataagattgcttttccatacttgtac
aacaaccttccgcaccatgtccacctcacctggtaccacactcccaatgttgtgttcatc
aaaaccgaggaccctgatctccccgccttctactttgatcctttgatcaaccccatctcg
cacagacattctgtcaagagtcaagaacccttgccagatgatgatgaggagtttgagctg
cctgagtttgtggaacctttcctcaaggacacacccctttacacagacaacacggccaat
ggcattgcccttctctgggcaccaaggcctttcaaccttcgctctggccgcacccgccgt
gccctggacatacccctggttaaaaactggtatcgggagcattgtcctgctgggcagcct
gtgaaggtgagggtctcctaccagaagctgctcaaatactatgtgctgaatgccctcaag
caccggccccccaaggcccagaagaagaggtatctcttccgatcctttaaggccaccaag
ttcttccagtccaccaagctggactgggtggaggtggggctgcaggtctgccgccagggc
tacaacatgctgaatcttcttatccaccgtaagaacctcaactacctacacctagactac
aacttcaacctgaagcctgtgaagacgctgaccaccaaggaacggaagaaatcccgtttc
ggaaatgccttccacttgtgtcgggaggtgctgcggctgaccaagcttgtggtagacagc
cacgttcagtaccgcctgggcaacgtggatgccttccagctagcagatgggctgcagtac
atctttgcccatgtgggacaactgacgggaatgtaccgctacaaatacaagctgatgcga
cagatccggatgtgcaaggacctgaagcaccttatctactatcgcttcaacacgggtcct
gtggggaagggcccaggctgcggtttctgggcagctggttggcgagtctggttgtttttc
atgcgtggcatcacccctcttttggaacggtggctgggcaacctcctggccaggcagttt
gaaggccgccactcaaagggggtggcaaagactgtgaccaagcagcgagtagagtctcac
tttgacttggagctccgggcagccgtgatgcatgacatcttggacatgatgcccgagggc
atcaagcagaacaaggcccggacaatcctgcagcacctcagcgaggcctggcgctgttgg
aaggccaacattccctggaaggttcctgggttgcccacacccattgagaacatgatcctg
cgctacgtgaaggctaaggctgattggtggaccaacactgcccattacaaccgagagcgg
atccgccgtggggccactgtggacaagaccgtttgtaagaagaacttgggtcggctcacc
cgactgtatctgaaggccgaacaggaacgacaacataattacctaaaggatggtccctac
atcacagcagaagaggcagtggctgtctacaccaccacggtgcattggctggagagccgc
agattctcccccatccctttccccccactctcctacaagcatgacaccaagctgctcatc
ctggctctggaacggctcaaggaggcctatagtgtgaagtcccgtttgaaccagtcccag
agggaggagctgggcctgatcgagcaagcctatgacaacccccacgaggctctgtctcgc
atcaaacgtcacttacttacacagagagccttcaaggaggtaggcattgagttcatggac
ctgtacagtcatctggtacctgtgtacgatgtggaacctctcgagaagatcacagatgcc
tacttagaccagtacctgtggtacgaagctgacaaacgcaggctctttccgccctggatc
aaacctgctgacacagagccacctcctctgctagtgtataagtggtgccaaggcatcaat
aacctgcaggacgtgtgggagacaagcgagggagaatgcaacgtcatgctggagtcacgc
tttgagaagatgtatgagaagattgacttgacgcttctgaacaggctgttgcgcctcatc
gtggaccacaacatcgctgactacatgacagccaagaacaacgtggtcatcaactacaag
gatatgaaccacacgaattcatatggaatcattcgaggactccagtttgcttccttcatc
gtgcagtactacgggctggtgatggaccttctcgtattgggcctgcacagggccagcgag
atggccggccctcctcaaatgcccaacgactttcttagcttccaagacatcgccacagaa
gctgcccaccccatccgcctcttctgtagatatattgaccgcatccacattttcttcagg
ttcaccgcggatgaggcccgggacctgatccagcgctacctgacggagcaccccgacccc
aacaatgagaacatcgtgggctacaacaataagaagtgctggccccgcgatgctcggatg
cgcctcatgaagcacgatgtcaacttgggccgggcagtgttctgggacatcaaaaaccga
ctgccacggtcagtgaccacggtgcagtgggagaacagctttgtgtcagtatacagtaag
gacaatcccaacctgctcttcaacatgtgtggcttcgaatgccgcattctgcccaaatgc
cgcaccagctatgaggagttcacccacaaggatggcgtctggaacctgcagaacgaggtc
actaaggagaggaccgctcagtgcttcctgcgtgtggatgatgaatcgatgcagcgcttt
cacaaccgtgtgcggcagatcctcatggcctctggttctaccactttcaccaagatcgtg
aataagtggaacacggctctcattgggctcatgacgtacttccgcgaggccgtggttaac
acccaggagctgttggatttgttggtgaagtgtgagaacaagatccagacccgcatcaag
atcgggctcaactccaagatgcccagtcgtttccccccggtcgtgttctacacccctaaa
gagctcggcgggctgggcatgctgtccatgggccatgtgctcatcccccagtcggacctc
aggtggtcaaagcagacggacgtgggcatcacccacttccgctctgggatgagtcatgaa
gaagaccagctgattcctaacttgtaccgctacatccagccttgggagagcgagttcatt
gactctcagcgggtctgggctgagtatgcgctcaagagacaggaggccattgctcagaac
aggcggctgactctggaggacttggaggattcatgggaccgaggcattccccggatcaat
accctgttccagaaggacaggcacactctggcttatgacaagggctggcgtgtccgcaca
gactttaagcagtaccaggtcctcaaacagaatccgttctggtggacgcaccagcggcat
gatggaaagctctggaacctgaacaattaccgcacagacatgatccaggccctgggtggt
gtggagggcatcctggagcacaccctcttcaagggcacttacttccctacctgggagggt
ctcttctgggagaaagccagtggctttgaggagtcaatgaagtggaagaagctgaccaat
gcccagcggtctgggttgaaccagatccccaaccgtcgcttcacactgtggtggtcaccg
accattaaccgagccaatgtgtacgtaggcttccaggtacaactggaccttactggcatc
ttcatgcatggcaagatccccacactgaagatctctctcatccagattttccgtgcccat
ttatggcagaagatccatgagagtattgtcatggatttgtgtcaggtatttgaccaagag
ttagatgcactggaaattgagacggtgcagaaggagacaattcaccccagaaagtcctat
aagatgaactcctcctgtgcagacatcttgctctttgcctcctataaatggaatgtgtcc
cggccctcgctgctggctgactctaaggatgtgatggacagtaccaccacccagaagtat
tggattgacatccagctgcgttggggtgactatgactcccatgacattgagcgttatgct
cgggccaagttccttgactacaccaccgacaacatgagcatctatccctcccccactggc
gtgctgattgccatcgacttagcatacaatctgcacagtgcctatggaaactggtttcca
ggtagcaagcctttgatccagcaagctatggcaaagatcatgaaggcaaaccctgccttg
tatgtgcttcgagagcggatacgcaaggggttgcagctgtactcatcagagcccactgag
ccctacctctcctcgcagaactatggtgaactcttctctaatcagatcatttggtttgtg
gatgacaccaatgtctatagagtcaccattcacaagaccttcgaagggaacttgactacc
aagcctatcaatggggccatcttcatcttcaatccaagaacagggcagctcttcctgaag
atcatccacacgtctgtgtgggctggacagaagcgtctgggtcagttggccaagtggaag
actgctgaggaagtggctgccctgatccgttctctgcctgtagaggaacagcccaagcag
atcatcgtgaccagaaaaggcatgttggacccattggaggtacacttgctggacttcccc
aacattgtgatcaaaggctcagagctgcagctgcccttccaggcctgtctcaaagtagag
aagtttggggaccttatcctcaaggccaccgagccccagatggttctcttcaatctctat
gatgactggctcaggaccatctcatcctacacggccttttcccgtctcattctgatcctc
cgtgccctccatgtgaacaatgaccgggccaaggtgatcttgaagcctgacaagaccacc
atcacagagccgcaccacatctggcccacgctgaccgatgaggagtggatcaaggtcgag
gtgcagctcaaggacctgatcctggctgactacggcaagaagaacaatgtcaacgtggcc
tcactaacacagtcagagatccgagacatcatcctgggcatggaaatctcagctccgtca
cagcagcggcagcagattgctgagattgaaaaacagaccaaggaacagtctcagctgaca
gcgacgcagacccgaaccgtcaataagcatggcgatgagatcatcacttccaccaccagc
aactatgagacccagaccttctcctcgaagactgaatggagggtcagggccatctctgct
gccaacctgcatctgcgaaccaaccacatctacgtgtcgtcagatgacatcaaagaaaca
ggctacacttacatccttcccaagaatgtgctcaagaaattcatttgcatttctgatctt
cgggcccagattgcgggctacctctacggagtgagccctccggataaccctcaagtgaag
gagatccggtgcattgtgatggtgcctcagtggggcacccaccagacggtgcacctgcca
ggccagcttccccagcacgagtacctcaaagagatggagccccttggctggatccacact
cagcccaatgagtccccccagctctcgccccaggacgtcaccacccacgccaaagtcatg
gcggacaacccctcctgggacggggagaagaccatcatcatcacctgcagcttcaccccg
ggctcctgtaccctgactgcctacaagctgactcccagtggctacgagtggggtcggcag
aacacagacaagggcaacaaccccaagggctacctgccctcccattacgagcgggtgcag
atgctgctgtctgatcgcttccttggcttcttcatggtgcctgctcaggcgtcctggaac
tacaacttcatgggcgttagacatgaccccaatatgaaatacgagctgcagctggccaac
cccaaagagttttaccacgaagtgcaccggccctcccacttcctcaactttgccctgctg
caggagggcgaggtctactccgcggaccgggaggatctctatgcctag
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integrated database retrieval system
