KEGG   Phascolarctos cinereus (koala): 110222308
Entry
110222308         CDS       T05867                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03420  Nucleotide excision repair
pcw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110222308 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110222308 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcw04121]
    110222308 (ERCC8)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110222308 (ERCC8)
Ubiquitin system [BR:pcw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110222308 (ERCC8)
DNA repair and recombination proteins [BR:pcw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110222308 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WDR55 WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_WDR11_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 110222308
NCBI-ProteinID: XP_020862891
UniProt: A0A6P5M3T4
LinkDB
Position
Unknown
AA seq 398 aa
MLGFLEARQAGLDDPGRLRRAEATRRVLKLELNKDRDVERIHGNGVNTLDIEPVERRYML
SGGSDGVIALYDLENFSRNVHYTCKAICSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSKVKLWDIRRASGCLITLDQHNGEKSKASSEA
ANTAHNGRVNGLCFTRDGLHLLTTGTDDRMRLWNSSNGENTLVNYGKVCNESRKGLKFTI
SHGCSPEFVFVPYGSTIAVYTVYSGELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNIL
AWVPALREPLPDEDDEVVSHSQKNPAFQDAWSSGDEEG
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgctgggcttcctggaggcgcggcaagccggcctggacgatcctgggaggcttcggaga
gcggaggccacccggagggtcttaaaattggaattaaataaagaccgagatgtggaaaga
atacatggcaatggtgtcaacacccttgatatcgaacctgttgagaggagatacatgttg
tcaggtggttcagatggcgttattgcactttatgaccttgaaaacttcagcagaaatgtt
cattacacatgcaaagctatttgttctgtgggcagaaatcatcctgatgttcacaaatac
agtgtagagacagtgcagtggtatcctcatgatactggcatgttcacctctagctcattt
gataaaactctgaaaatatgggatacaaacacattacagcctgcagatgtatttcatttt
gagggaacagtctatagtcatcatatgtctccagttgccaccaaacactgtttgatagca
gttggtactaaaggccccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attctacagggccatagacaggaaatattagcagtttcctggtctccacgttacgaatat
atcttggcaacagcaagtgctgacagtaaagtaaaattgtgggatattaggagagcatca
ggatgcctgattacccttgatcagcacaatggggaaaagtcaaaagcatcttctgaagca
gcaaacacagcccataatggaagagttaatggcctgtgctttacaagagatgggcttcac
cttctaactactggaacagatgatcgaatgaggctctggaatagttccaatggagaaaac
acactagtaaactatggtaaagtctgtaatgaaagtagaaaaggattgaaatttaccatc
tctcatggctgcagtccagaatttgtctttgtaccatatggtagcaccattgctgtttat
acagtttactcaggagaactgataactatgcttaggggacattataatactgttgactgc
tgtgtatttcaacctaatttccaggaactttatagtggtagcagagactgtaatattctt
gcttgggtgccagctttacgtgaacccctgcctgatgaagatgacgaggttgtatctcat
tcacagaaaaatccagcatttcaagatgcatggagcagcggtgatgaagaaggataa

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