Phascolarctos cinereus (koala): 110222541
Help
Entry
110222541 CDS
T05867
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110222541 (PDZRN3)
Enzymes [BR:
pcw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110222541 (PDZRN3)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110222541 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
PDZ_Tricorn
zf-rbx1
TRAF3_RING
zf-TRAF
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
110222541
NCBI-ProteinID:
XP_020863238
UniProt:
A0A6P5M0N1
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MGFELDRFDGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVQCQRIS
TKELNHVLPLKSLILKLDIKCDHHGRGCERVVKLQQLGEHVEMCDYSPARCRHPGCGEVL
NLKDVDSHMRERCEARPAGLCEQGCGLVLTHGELRPGAHCCFQALKAHSGALQAKVAGLE
KELKKEALRAGKREKSLVAQLAAVQLELQMTALRYQKKFTEYSARLDSLSRSVASPGSKG
EEMKTMTLVLHRDSGSLGFNIIGGRPCVDNQEGSSSEGIFVSKIVDSGPAAKEGGLQIHD
RIIEVNGKDLSKATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPSLDSQLVDMGTQTDI
TFEHIMALTKMASPTPPVLDPYLLPEEHSSAHEYYDPNDYMGNIHQEMDRDELELEEVDL
YRLNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNRE
EAVALLTSEESKNVSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTASV
LQQKKHEEDEGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNADDHTTSSNTLGS
QRKLMYSQDTLGSGDVPFSNESFISADCTDADFLGIPVDECERFRELLELKCQVKSANPY
SLYYQNSALEVNKSDPESVDRELEMLNEELRNIELECLSIVRAHKMQQLKEQYRESWMLH
NSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRI
AESISCQGSDGAMTSSAACKASQRNLLAITESPETSSPKYCPSPKELDLSKQLESKEKKA
NEESKSPTQSPKLGGSYLSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSL
VSMCKDLNSSNQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDD
AISEMKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSH
KKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggatcgcttcgatggcgacgtggacccggacttcaagtgcaatcta
tgcaacaaggtcttggaagaccccttgaccaccccgtgcggtcatgtgttctgcgccggc
tgcgtcctgccctgggtagtgcagcagggcagttgcccggtacagtgccagcggatctcc
accaaggagctcaaccacgtcctgccgctcaagagcctcatcctcaagctggacatcaag
tgtgaccaccacgggcgcggctgcgagcgggtggtgaagctgcagcagctgggggagcac
gtcgaaatgtgcgactactcgccggcacgctgccgccacccgggctgcggcgaggtgctc
aacctcaaggacgtggacagccacatgcgcgagcgctgcgaagcgcggcccgccggcctg
tgcgagcagggctgcggcttggtgctgacccacggcgagctgcggcccggcgcgcattgc
tgcttccaggcgctcaaggcgcacagcggcgcgctgcaggccaaggtggccggcctcgag
aaggagctcaagaaggaggcgctgcgggccggcaagcgcgagaagtcgctcgtggcgcag
ctggccgcggtgcagctggagctgcagatgacagcgctgcgctaccagaagaagttcacg
gagtatagcgcccggctcgactctctcagccgcagtgtcgcttccccaggcagcaagggt
gaagaaatgaaaacaatgactcttgtccttcatcgtgactctggctctctgggatttaat
attatcggtggccgaccgtgtgtggataatcaagagggatcatccagtgaaggaattttt
gtatcaaaaatagttgacagtgggccagctgccaaagaaggagggctacagattcatgac
cggattatcgaggtgaatgggaaagacttatccaaagcaacccatgatcaagctgtggaa
gctttcaagacagccaaagaacccattgtcgtccaggtcttaaggcggacccctcgaaca
aagatgtttactccttcactcgactcccagctggtggacatgggcacccaaacggatatc
acctttgagcatatcatggcgctgactaagatggcatcccccaccccaccagtgctggat
ccgtatctcttgcctgaagagcattcatccgctcatgaatactacgatccaaatgactac
atggggaacatccatcaggagatggacagagatgagctcgaactggaggaggtggatttg
taccgactgaatagtcaagacaaactggggctcactgtgtgttaccggacggatgatgaa
gatgacattgggatttatataagtgagattgatcccaacagcattgctgcaaaggatgga
cgcatacgagagggagaccggatcatccaaattaatgggatagaggtacaaaaccgagag
gaagctgtggcgcttctcaccagtgaagaaagcaagaatgtctccttgctcatagcaaga
cctgaactccagctggatgaaggatggctggatgatgatagaaacgatttcctggatgac
ttacacatggacatgctggaagaacagcaccaccaagctatgcagttcacagcgagcgtg
cttcagcagaaaaaacatgaggaagatgaaggcaccacggacacggccaccatcttgtcg
aaccagcatgagaaggacagtggtgtggggcgcacagatgagagcacccgcaatgacgag
agctctgagcaggagaacaacgctgatgaccacaccacatcttctaacactctggggagc
cagaggaaactgatgtacagccaggacacgcttgggagtggagacgtgcccttcagcaac
gagtcctttatttcagccgactgcacagatgccgacttccttgggatcccggtggatgag
tgtgagcgatttcgggaactcctggaactcaagtgccaagtgaagagtgccaatccctac
agcctgtattatcagaacagtgcccttgaagtgaacaagagcgaccccgagagtgtggac
agagagctggagatgctgaatgaagagctccgcaacattgagttggaatgtctgagcatt
gtcagggctcacaagatgcagcagctgaaggagcagtaccgagagtcatggatgctgcac
aatagcggattccggaattacaacaccagcattgacgtccgaaggcacgagctctccgac
atcactgaactccctgagaaatcggacaaagacagctccagtgcctacaacactggagag
agctgccgcagtaccccgctcaccttagaaatctccccagataactccctgcggagaatt
gccgaaagcatcagctgtcaaggcagcgatggggcgatgaccagctctgccgcttgcaaa
gcatcccagaggaatctgctcgctatcacagagagtccggagaccagcagccccaagtac
tgcccctctccaaaagagcttgatcttagcaaacagctggagagcaaagagaaaaaggcc
aatgaggaaagcaagagcccaacccagagtccaaagttgggtggctcttatctctccccc
tatcaccactccccctacaagcatgctcacatccctgcccacgcccagcattaccagagt
tacatgcagctgatccagcagaagtctgccgtggagtatgcccagagccagatgagtctg
gtcagcatgtgcaaggacttaaactcttccaaccagtctgaaccccgaatggaatggaag
gtgaagataagaagcgatggaacccgctacatcaccaagcggccagtgcgagacaggctc
ctgcgcgagcgagccctgaagatccgagaagagcgcagcggcatgacaacagatgatgac
gccatcagcgagatgaagatgggacgatattggagcaaagaggagcggaagcagcatgtc
gtgaaagcgaaggagcagaggagaaggcgtgagttcatgatgcagagcaggctggactgc
ctaaaagaacagcaaggggccgaagagaagaaggaaatgaacatcattgaactgagccac
aaaaagatgatgaagaagagaaacaaaaaaatctttgataattggatgaccatccaagaa
ctcttaacccacggtacaaagtcccctgatggcactagagtatacaattccttcttatca
gtgactactgtataa
DBGET
integrated database retrieval system
