KEGG   Phascolarctos cinereus (koala): 110222769
Entry
110222769         CDS       T05867                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03030  DNA replication
pcw03410  Base excision repair
pcw03420  Nucleotide excision repair
pcw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110222769 (RFC5)
   03410 Base excision repair
    110222769 (RFC5)
   03420 Nucleotide excision repair
    110222769 (RFC5)
   03430 Mismatch repair
    110222769 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcw03032]
    110222769 (RFC5)
   03036 Chromosome and associated proteins [BR:pcw03036]
    110222769 (RFC5)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110222769 (RFC5)
DNA replication proteins [BR:pcw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110222769 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    110222769 (RFC5)
Chromosome and associated proteins [BR:pcw03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110222769 (RFC5)
DNA repair and recombination proteins [BR:pcw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110222769 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    110222769 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_16 AAA_22 AAA_24 AAA_assoc_2 AAA_11 AAA_14 RuvB_N DEAD DUF815 ResIII AAA_5 AAA_19 PhoH ATPase_2 TIP49 AAA_7 AAA_30 TniB DNAX_ATPase_lid nSTAND3 bpMoxR Mg_chelatase Thioredoxin_6 NPHP3_N IstB_IS21 AAA_2 AAA_3 Gp44_lid AAA_25
Other DBs
NCBI-GeneID: 110222769
NCBI-ProteinID: XP_020863592
UniProt: A0A6P5LYK6
LinkDB
Position
Unknown
AA seq 349 aa
MEAPAVRKQQQQQQQQQQQQQPAAKSRNLPWVEKYRPQTLNDLISHQDILSTIQKFISED
RLPHLLLYGPPGTGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFAST
RTIFKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTR
FRFGPLTPELMVPRLEHVIEEENVDISDDGMKALVTLSSGDMRRALNILQSTNMAFGKVT
EETVYTCTGHPLKSDVANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRV
DFPPPVRIHLLIKMADIEHRLAVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaggctccggccgtccggaagcagcagcagcagcagcagcagcagcagcagcaacaa
cagcctgcggccaaaagcaggaacctaccctgggttgaaaaatatcgaccacagacactg
aatgacctaatctcccatcaggatatcctaagcaccatccaaaaatttatcagtgaagat
cgactaccgcatctgcttctctatggccctcccgggacaggaaagacatccaccatcctg
gcctgtgccaaacagctctacaaagacaaagagttcaactccatggtcctggagctcaat
gcttctgatgaccgaggaatagatattgtacgaggaccaatcctgagctttgccagcaca
aggacaatatttaagaaaggttttaaacttgtgatattggatgaggcagatgccatgacc
caggatgctcagaatgccttgagaagagtgattgagaaattcacagagaataccaggttt
tgcctcatctgtaattatctgtcaaagatcatccccgccctgcagtctcgatgtacaagg
ttccgatttggccccttgacccctgagctgatggttccccgcctggagcatgtcatagaa
gaagagaatgttgacataagcgacgatggaatgaaagcacttgttaccctttccagtggt
gatatgcgaagggctctgaacattttgcagagcaccaacatggcctttgggaaggtaacc
gaggagacggtatatacctgcacggggcacccactcaagtctgatgtcgccaacattctt
gactggatgctgaaccaggactttaccacggcgtaccggaatatcatggaactgaaaacc
ctgaagggtttggcattgcacgatattctgacagagatacacttatttgtacatcgagtt
gactttccacctccagttcgaatacatttgctgatcaaaatggcagacattgaacacaga
cttgctgttggcacaagtgagaagattcagctaagttccctcatcgctgcttttcaagtc
accagagatttaattgtagcagaagcctga

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