Phascolarctos cinereus (koala): 110223217
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Entry
110223217 CDS
T05867
Symbol
RNF40
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110223217 (RNF40)
Enzymes [BR:
pcw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110223217 (RNF40)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
110223217 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
110223217
NCBI-ProteinID:
XP_020864258
UniProt:
A0A6P5M3C5
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSGAGNKRAAGDGGSGPSEKKQNREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEVLLRRHEGRGELLS
RTEEPGAQDGTEPDGAPLPELGNTERRDLPTLQLRPPLSEPALAFVAALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLHRRVEELCHRVQSRGECESLGEGLRTLTRELGQDNRRL
QDLTTQLQEKHHRISLEYSELQDKVTSAETKVLEMETSVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSGSFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRSNERLKVALRSLPEEVVRETGEYRLLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQTVGSGPSAPSQTASEDQGS
GGGTLAPVKEEESSGSGLAALQEIKKESVSAPVTPTASMASVVKKEEPPFEEEVPLTQAQ
TPHTIPQTPASRSREAEPRGKREPRDREGPGSGTPTSSSSRGDRDKAKAEESKRKESELL
KGLRGELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRIRDLEE
KERKESKKLADEDALRRIRLAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQN
GRLIQQLREKDDANFKLMSERIKSNQIHKLLREEKDELGEQVLGLKSQVDAQLLVVQKLE
EKERVLQGSLGASVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQSRLREIQPCL
AESRAAREKESFNLKRAQEDISRLRRKLEKQKKVEVYADADEILQEEIKEYKARLTCPCC
NTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggccggcaacaagcgcgcagccggggatgggggctcgggcccctcggagaag
aagcagaatcgagaggagaagaccacgactacccttatcgagcccatccgcctgggaggc
atctcctccacggaggagatggacctgaaggtgctacagttcaagaataaaaaattggct
gagcgactggaacaacgacaggcctgtgaagatgaactaagggagcggattgaaaagcta
gaaaagcgccaggccactgatgatgctacactgctcattgtcaaccgctattgggcccag
ctggatgaaactgtagaggtcctactccgacgacatgagggacggggagaattgctatct
aggacagaggaaccgggagctcaagatggcactgaacctgatggggcccctctgcctgaa
ctgggaaacacagaaagaagagatctgcccactcttcagcttcggcccccactgagcgag
ccagctttggcttttgtggcagccctgggtgccagcagtagcgaagaggtagaacttcag
ctccagggccgcatggagttctccaaggcagcagtgtccagagtagtagaggcctcagac
cgacttcatcggcgagtagaagaactgtgtcatcgagtccaaagcagaggagagtgtgaa
tctctcggggaaggccttaggactttaaccagggagcttggacaagacaacaggcgacta
caggacttgaccacacagctgcaggagaagcaccaccgaatctctctggaatactcagaa
ctgcaagacaaggtgacatcagcagagaccaaggtgctggagatggagacttcagtggag
gatcttcagtgggacattgagaaactgcgcaaacgggagcagaagctcaataagcaccta
gctgaagctctggagcagctcaactcaggctactatgtatcagggagctcagggagtttc
caaggaggccagatcacactcagtatgcaaaagtttgagatgctgaatgctgagctagaa
gagaaccaagagctggccaatagccgcatggcagagttggaaaagcttcaggcggagctg
cagggtgctgtgcggagcaatgagcggctgaaggtggctcttcggagcctgcctgaagaa
gtggtaagagagactggtgagtaccgactgctccaggctcagttctctctgctctacaat
gaatccttgcaagtgaagacccagctagatgaggcacgggggctacttctggctaccaag
aactcccatctcaggcacattgagcacatggagagtgatgagctaagcctgcaaaagaag
cttcgaactgaagtgattcagctagaggacacattagcccaggtgcgcaaagagtatgag
atgctgcgaatcgaatttgagcagaacctggcagccaacgagcaggcagggcccattaac
cgggagatgcgccacctgatcagcagcctgcaaaaccacaaccatcagttgaagggcgac
gcacagcggtataagcggaagctgagggaggtgcaggcagagattggcaagctccgggca
cagactgtcggctcaggcccttcagccccatcccaaactgcctctgaggatcagggatca
ggaggaggaacattggccccagtgaaagaagaggagagttctgggtcagggctagctgcc
ctccaggaaatcaaaaaagagtcagtctcagccccagttacccccacagcttccatggcc
agcgtggtgaagaaagaagagcccccttttgaagaggaggtgcctcttacccaggcccaa
accccacacactataccccaaacacctgcttccagaagccgagaggctgagcctcgagga
aaacgagagccccgagaccgggaagggccaggttctgggaccccaacatcctcttcctca
aggggagatcgagacaaggccaaggctgaggagagcaagaggaaagaatcagaattactc
aagggacttcgaggggagctcaagaaggcccaagaaagtcagaaggagatgaaactgctg
ctagacatgtacaagtctgcccccaaggagcagagggacaaggtgcagctcatggctgca
gaacgcaaggccaaggctgaggtggatgagcttcggggccgcatccgggatctggaggaa
aaggaaaggaaagaaagtaagaagttggccgatgaggatgctcttcgaaggatccgactg
gcagaggaacagattgagcacctgcagcgcaagctcggggccaccaagcaggaggaggaa
gcgctgctctcagagatggacgtgactggtcaggcttttgaggatatgcaggagcaaaat
ggtcgccttatacaacagctgagggaaaaggatgatgccaatttcaagctaatgtcagag
agaatcaagtccaaccagatacataagctcctccgggaagagaaagatgagctgggggag
caggtcctgggcctcaagtctcaggtggatgctcagctcttggtggtacagaagctggaa
gagaaggaacgagttcttcagggcagcctgggggcgagcgtagagaaggagctgacccta
cggagccaagccctggagcttaataagaggaaggcagtggaagcagcacagctggctgag
gacctcaaggtgcagctggaacacgtgcaaagccggcttcgggaaatccagccctgcctg
gccgagagccgagcagctcgagagaaggagagcttcaacctcaagagggcccaggaggac
atttctcgactccggcggaagctggagaagcagaagaaggtagaggtctatgccgatgct
gatgagattctacaggaggagataaaggagtacaaggcccggttgacctgtccctgctgt
aacacccggaagaaagatgctgtcctcaccaagtgctttcatgtcttctgctttgagtgt
gtacggggccgctatgaggcccgccagagaaaatgcccaaagtgtaatgctgcttttggg
gctcatgacttccaccgtgtctatattagctga
DBGET
integrated database retrieval system
