Phascolarctos cinereus (koala): 110223600
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Entry
110223600 CDS
T05867
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110223600 (CHD1)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110223600 (CHD1)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110223600 (CHD1)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110223600 (CHD1)
SLIK complex
110223600 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CHD1-like_C
CDH1_2_SANT_HL1
Helicase_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
110223600
NCBI-ProteinID:
XP_020864870
UniProt:
A0A6P5M2M4
LinkDB
All DBs
Position
Unknown
AA seq
1724 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGS
HSDSESDTSREKKVQSKPPKVDSSEFWKSNPSVLAVQRSAMLRKQQQQQQQTSSNSGSEE
NSSSSEDSEDESSSEVKRKKHKDEDWQMSGSGSPSQTGSDSESEEEREKSSCDESESDYE
PKNKVKSRKPQIRTKAKNGKKISGQKKRQIDSSEEDDDDYDKRGSRRQATVNVSYKEDEE
MKTDSDDLLEVCGEDVPQPEEDEFETIERFMDSRIGRKGATGATTTIYAVEADGDPNAGY
EKTKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNAS
PEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGA
LISKKFQPRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGPEGLELRDYQLN
GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR
EIQTWAPQMNAVVYLGDINSRNMIRTHEWMHLQTKRLKFNILLTTYEILLKDKAFLGGLN
WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS
WEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYK
WILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSS
GKLILLDKLLIRLKERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL
DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV
NIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSA
ILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNM
DEDDIELEPERNSRNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEG
RRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLER
LDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGQDRTGLLLFEHRPFMTEPCGR
LGKVKGPTFRISGVQVNAKLVISHEEELVPLHKSIPSDPEERKQYTIPCHTKAAHFDIDW
GKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLL
NKDLAKKEAQRLSGSGNSKRRKIRTKKNKMVKSVKTREEIRSDSSPLPSDKSDEDDDKLS
ETKSDSKEKSKKSTISDAPVHITASGEPVPISEDSEELDQKTFSVCKERMRPVKAALKQL
DRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDAR
KLHKLYKHAIKKRQDSQQNNDQNSSSVNTHMIRNPDMERLKENTNHDDSSRDSYSSDRHL
SQYHDHKDRHQGDAYKKNESRKRSYSSFSNGKDHREWDHYKQESRYYNDNKHRKMDDHRS
RDHRSVLEGSLKDRPHPDHRSHSDHRLHSDHRSSSEYSHHKTSRDYRYHSDWQMDHRASS
SGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctggatcagcctctggatctggttctggatcaagctccggaagcagtagt
gatgggagcagcagtcagtcaggcagcagtgattctgactccgggtctgactcaggcagt
cactctgattctgagtcagatacttctagagaaaagaaagtacaatcaaaaccaccaaaa
gttgatagctctgagttttggaaatcaaatcctagtgttctggctgtccaaagatctgca
atgcttagaaagcagcagcagcagcaacaacaaacttcctccaatagtggatcagaagag
aattcttctagcagtgaagattctgaagatgagtcatccagtgaggtcaagaggaaaaaa
cataaagatgaggattggcagatgtcagggtcaggatctccctcccagacgggttcagat
tctgaatcagaagaagaaagagaaaaaagcagttgtgatgaaagtgaatctgactatgag
ccaaaaaataaagtcaaaagcaggaaacctcaaatcagaactaaagcaaaaaatggaaag
aagatctctggacagaagaagagacagattgattcttctgaagaagatgatgatgattat
gataaaagaggttctcgtcgccaggcaactgtcaatgttagttataaggaagatgaagaa
atgaaaacagattcagatgatttgttggaggtttgtggagaagatgttcctcaacctgaa
gaagatgaatttgagacaatagaaaggtttatggacagtaggattggaagaaaaggagca
actggtgctactacaaccatctatgcagttgaagcagatggtgaccccaatgctggatat
gaaaaaactaaggaaccaggagagatccagtatttaattaaatggaaaggatggtcccat
atccataacacttgggagactgaagaaaccttaaaacagcagaatgtgaaaggaatgaaa
aaattggacaattacaagaagaaagatcaggaaaccaaacgatggttgaaaaatgcttct
ccagaagatgtggagtattataattgtcagcaagaacttactgatgatctacataagcag
tatcaaatagtggagagaataatcgctcattccaatcaaaagtcagcagctgggtatcct
gattattattgcaaatggcagggcctcccatattcagagtgtagctgggaagatggggct
cttatttccaaaaagtttcagccacgcatcgatgaatatttcagcaggaatcaatccaaa
accactccttttaaagattgcaaagtattaaaacaaaggccaaggtttgttgcactgaag
aagcaaccatcctatattgggggaccagaaggtttagaattaagagattatcagttgaat
ggtctaaattggcttgctcattcttggtgcaaaggaaatagctgtatacttgctgatgaa
atgggccttggaaaaacaatacagacgatctcatttcttaactatcttttccacgaacac
caattgtatgggcctttcttgttagtagtaccactttccacactcacttcctggcaaaga
gagattcagacatgggctccccagatgaatgctgtagtctatttaggggatattaacagc
agaaatatgataagaacacatgaatggatgcatcttcaaaccaaacggttaaaatttaat
attcttttgacaacttatgaaattttattgaaagataaggctttccttggtggcctgaat
tgggcattcataggtgtagatgaagctcatcgattaaagaatgacgactcacttttatat
aagaccttaatagactttaaatccaatcatcgtcttcttattactggaacccctctacaa
aattcccttaaagagctctggtctttgctccacttcatcatgccagaaaaattttcttcc
tgggaagattttgaagaggaacatggcaaagggagagaatatgggtatgcaagtctccac
aaggagcttgagccttttctgttacgccgagttaagaaagatgtagaaaaatctctgcct
gccaaagttgagcaaattttaagaatggaaatgagtgcattgcagaagcaatattacaaa
tggattttaaccaggaattacaaagcccttagcaaaggttcaaagggcagtacctcaggc
tttttgaacataatgatggagctcaaaaagtgttgtaaccattgctacctcatcaaacca
cctgataataatgaattctataataaacaggaggccttacagcatttaatccgaagtagt
ggaaaattaattcttcttgataagctgttgattcggctaaaagaacgaggcaacagagtt
ttaattttctctcaaatggtgcggatgttagacatacttgcagaatatttgaagtatcgt
caattcccttttcaaagattagatggttcaatcaaaggagaattaagaaaacaagcatta
gatcattttaatgctgaaggatctgaggacttttgtttcttactttccacaagggctgga
ggactaggcatcaatttagcatctgctgacactgttgttatatttgattctgactggaac
ccacaaaatgatctgcaggcacaagctagagcccatagaattgggcagaaaaaacaggtt
aatatttatcgtctagttacaaaaggatcagttgaagaagatattcttgaaagagccaaa
aaaaagatggtgcttgatcatctggtaattcagagaatggacacaactgggaagactgtt
ctacacacaggttctgctccctcaagttctacaccttttaataaggaagagttatcggca
attttaaaatttggtgctgaagaactttttaaagaacctgaaggagaagaacaagagcct
caggaaatggatattgatgaaatcctgaagagagctgaaactcatgaaaatgaaccaggc
ccattaactgtaggagatgaattgctttcccagtttaaggtagccaatttttcaaatatg
gatgaagatgatattgaattagaacctgaaagaaattcaagaaattgggaggaaatcatt
ccagaagatcaaagaagaaggctagaagaagaagaaagacaaaaggaacttgaagaaata
tatatgctaccaaggatgagaaactgtgcaaaacagattagcttcaatggaagtgaaggc
cgacgcagcagaagtagaagatactctggatccgatagtgattcgatatctgaaagaaaa
aggccaaagaaacgtggaagaccaaggactatcccgcgagagaatattaaaggatttagt
gatgcagaaattaggcggtttatcaagagttacaagaaatttggtggtcctctggaaaga
ttagatgcgattgctcgagatgctgaattagttgataagtcagagacagacctcagacga
ctaggggagctggtgcataatgggtgtatcaaagctttaaaggatagttcctctggacag
gaccgaacaggactcttgctatttgaacacagaccttttatgacagaaccttgtggtaga
cttggaaaagtgaagggtccaacattccgaatatcaggagtgcaagtgaatgccaaatta
gtcatctctcatgaagaagaattagtaccattgcacaaatcgattccatcagatccagaa
gaaaggaaacagtataccatcccatgccacacaaaggcagctcactttgatatagactgg
ggcaaagaagatgattccaatctattaattggcatctatgaatatgggtatggcagctgg
gaaatgattaaaatggatcctgaccttagtttaacacacaagattctaccagatgatcct
gataaaaaaccccaagcaaagcagttgcagacccgagcagactacctcattaaattactt
aataaagatctggcaaaaaaagaagctcagagactttctggttcaggaaattcaaagagg
aggaaaataaggactaagaagaataaaatggtgaagtctgttaaaacgagagaagaaata
aggagtgattcttctccattgccctcagacaaatctgatgaggatgatgacaagctcagt
gaaaccaaatctgatagcaaagaaaaatctaagaaatccacaatttcagatgctccagtt
catatcactgcaagtggtgaaccagttcctatatctgaggattctgaggagctggaccag
aagacattcagtgtttgcaaagaaagaatgaggcctgtcaaagcagccctgaaacagctt
gatagacctgaaaaggggctttcagaaagagaacagctggaacatactagacagtgtcta
atcaaaattggtgatcatatcactgaatgtctaaaagaatatacaaatcctgaacaaatt
aagcagtggagaaagaatttgtggatttttgtgtccaagttcacagaatttgatgcaaga
aaactacacaaattgtataagcatgcaattaagaaacggcaagactctcagcaaaacaat
gaccagaacagcagcagcgtgaatactcatatgattaggaatccagatatggaaaggcta
aaagagaatacaaatcatgatgacagcagcagggacagttattcttctgacagacatttg
tctcaatatcatgaccataaagataggcatcagggagatgcttacaaaaagaatgagtcc
aggaaaagatcgtattcatcctttagcaatggtaaagatcaccgggaatgggatcattac
aaacaagaaagcagatactacaatgataataaacacagaaaaatggatgaccataggagt
agggatcacagatcagttttggaaggaagtttaaaagaccgacctcatcctgaccaccgt
tctcattcagatcaccggttgcactcagatcatcgatcaagttctgaatattcacaccat
aaaacttcaagagattatcggtatcattcagattggcagatggaccacagagcttccagt
agtggccctaggtcaccactagatcagaggtctccttacggctcaagatcacctttaggt
catagatctccatttgaacattcatctgatcacaaaagtacacctgagcatacttggagt
agccggaaaacataa
DBGET
integrated database retrieval system
