Phascolarctos cinereus (koala): 110223692
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Entry
110223692 CDS
T05867
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04140
Autophagy - animal
pcw04148
Efferocytosis
pcw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110223692 (VPS18)
04148 Efferocytosis
110223692 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110223692 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110223692 (VPS18)
Membrane trafficking [BR:
pcw04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110223692 (VPS18)
Hops complex
110223692 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-RING_16
zf-C3HC4_2
zf-ANAPC11
KNOX2
zf-C3H2C3
zf-RING_2
zf-rbx1
KIF21A_2nd
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
110223692
NCBI-ProteinID:
XP_020865011
UniProt:
A0A6P5MA20
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGFVNVPLEKEAPIFTKQRIDFTPSDRITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDEAKVHKMFLDHTGSHLLIALSSTE
VLYINRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYILLEEGGPAPVCSIEAERGLDGRCFVIATTRQRLFQFTGRVAEGAE
VQGFSGLFATYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWDYPPGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAHTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYVESARCYALTQSYFEEIALKFLEVRQEEALAEFLQRKLAGL
KPAERTQATLLTAWLTELYLSRLGALQGDADSLPLYRETRERFRDFLSSPRNKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLSRHHDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQAAALLAYLEQAGTNPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
EFYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVKTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLQAYNRHIDELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSACDFPLLNRPFYVFLCSHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPTKGPARTKEGEGGTPGAPSREQLKADLDELVAAECVYCGELMIRSIDRPFID
PQRYEEEHQSWL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaagactcgctgtcgcgctcggccgtcctgcagccg
ggctgccccagcgtgggcatcccccactcggggtttgtaaatgtcccactggagaaggag
gcacccatctttaccaagcagcgaattgactttactccctctgaccgtatcaccagcctt
gtagtctcctgcaatcaactctgcatgagcttgggcaaggacactctactccgcatcgat
ctgggaaaggcaaatgagcccaaccatgtggagttgggacgcaaagatgaagccaaagtt
cataagatgtttctggatcacaccggctcacacctcttgattgccctgagcagtaccgaa
gtcctctacataaaccgcaatggacagaaggttcggccactggcacgatggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggcacagagagcagcactgggcccatc
ctagtgggtacagcccagggccagatctttgaagcagaactctcagccagtgaaggtggc
ctttttggtcctgcacctgacctctacttccgcccactttatatactgctggaggaggga
ggcccagcacctgtgtgctccatagaggcagaacgtggcctcgatggacggtgttttgtc
attgccactactcgccagcgcctattccagttcacaggccgtgtggcagagggggctgag
gtccagggcttttccgggctctttgccacatatactgaccacccaccaccttttcgagaa
ttccccagcaatctgggttacagtgagttggctttctatacccccaagctgcgctctgcg
ccccgtgcttttgcttggatgatgggggatggcgtactgtacggcgcattggactgtggg
cgtcccgattctttgctgagtgaagaaagagtgtgggattatccacctggtgtaggccct
ggagccagcccacccctggctatcgtcctgacccagttccacttcttgctgctcctagca
gaccgagtagaagcagtgtgtacattaacagggcaggtggtgttacgagatcactttcta
gaaaaatttgggccactacgacatatggtgaaagactcctctactggccacctgtgggct
cacactgagcgtgctgtgttccgttatcacgtacagcgtgaggcccgggacgtttggcgc
acctatctggatatgaatcgttttgacctggccaaagaatattgccgtgagcggcctgac
tgcctagacacggttctggcccgtgaggctgacttctgcttccgccagcgccgctacgtg
gagagcgctcgatgctatgccctgacccaaagctactttgaagagattgccctcaagttc
ctggaagttcgacaggaggaggccttggcagaattcttgcagcggaaattggcggggctg
aagccagctgagcgcacccaggccacactgctcactgcctggctgacagaactctacttg
agccggctaggagcacttcagggtgatgcagattctttgcctctttatcgggaaacacga
gagcgattccgagactttctcagtagcccgcgcaacaaagaatggctctttgccagccga
gcctcaatccatgagttgctggccagccatggggacacagaacacatggtgtattttgct
gtgatcatgcaggactatgaacgggttgtagcatatcactgccagcatgaagcctatgag
gaggctttggctgtgctctcccggcaccatgatccccagctcttttataaattttcaccc
attctcattcgtcatattcctcgacagttggtggatgcttggattgagctgggcagccga
ctggatgcccggcagctcatcccagccctggtgaactacagccaaggtggggaagcccag
caagtgagccaggccatccgctacatggaattctgtgtgaatgtgctaggggaaactgag
caagccattcacaactacctgctctcattgtatgcaagaggtcaggctgctgcattgctg
gcctacctggagcaggcagggaccaatccccaccgggtgcactatgacctcaaatatgcc
ctacgactctgtgcagagcacggccatcaccgggcctgtgttcacgtctacaaggtgtta
gagttttatgaagaggctgtcgacttagctctccaggtggatgtggacctggctaaacag
tgtgcagatctgccggaagaggatgaggagctgcgtaagaaactgtggctgaaaatcgcc
cggcacgtggtacaagaggaagaagatgtgaagactgccatggcctgtctggctagttgt
cctctcctcaagatagaggatgtgttgcctttctttccagactttgtcactattgaccac
ttcaaggaggccatctgcagctccctgcaggcctacaaccggcacattgatgagctccag
cgggagatggaggaagctacagccagtgcccagcggattcggcgagacctgcaggagctt
cgtgggcgctatggcactgtggagcctcaagacaagtgctcagcctgtgacttccccctg
ctcaatcgtcctttctatgtctttctttgcagtcacatgttccatgctgactgcctcctg
caggccgttaggcctggcctccctgcctataagcaagcccgtctggaggagctgcagcga
aagctaggggctgctccacctcccaccaaaggcccagcccgcacaaaagaaggagaagga
gggactccaggagcacccagccgggaacagctgaaagctgacctggatgaactggtggca
gctgagtgtgtctactgtggggagttgatgatccgttccattgaccggcctttcatcgat
ccccagcgatatgaagaagaacaccaaagctggctttag
DBGET
integrated database retrieval system
