Phascolarctos cinereus (koala): 110223909
Help
Entry
110223909 CDS
T05867
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04340
Hedgehog signaling pathway
pcw04360
Axon guidance
pcw05200
Pathways in cancer
pcw05205
Proteoglycans in cancer
pcw05217
Basal cell carcinoma
pcw05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110223909 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110223909 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110223909 (SHH)
05205 Proteoglycans in cancer
110223909 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
110223909 (SHH)
05217 Basal cell carcinoma
110223909 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcw01002
]
110223909 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110223909 (SHH)
Peptidases and inhibitors [BR:
pcw01002
]
Cysteine peptidases
Family C46: hedgehog family
110223909 (SHH)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Morphogens
110223909 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
110223909
NCBI-ProteinID:
XP_020865298
UniProt:
A0A6P5M5Z2
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MDEMLLLTRFLLVVLVSSLLMSSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSD
FLAFLDREDGAKKVFYVIETREPRERLLLTAAHLVFVAPHNDSGPEPLPPGEPSDWAWQR
PPPGVAAGRQSLFASRVRPGQRVYVVEERGGDRRLLPAAVHSVSLREEATGVYAPLTAQG
TILINRVLASCYAVIEEHSWAHWAFAPFRLAHALLAVLSPTGRDCGGGGGGPGGGGGGPL
LLPAASPDVPDAPDAGATTAGIHWYSQLLYQIGTWLLDSDALHPLGMAVKSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctactgacgagatttctgctggtggtcctcgtctcttctctcttg
atgtcctcggggctggcgtgcggacctggcaggggatttgggaagaggcggcaccccaag
aagctgacccccttagcctacaagcagtttatccctaacgtggcggagaagaccctaggg
gctagtggaagatacgaagggaagatctccagaaactccgagcgatttaaagaactcacc
cccaattacaatcctgacattatatttaaggatgaagagaacaccggagcggaccggctg
atgactcagaggtgtaaggacaaactgaatgccctggctatctctgtcatgaaccagtgg
cccggggtgaaacttcgggtcactgagggctgggatgaggatggccaccactctgaagag
tcgctacactatgagggccgggcagtggacatcactacttcagaccgggaccgaagcaaa
tatggcatgctggcccgcctggctgtggaggcaggcttcgactgggtctattacgaatct
aaagcccatatccactgctctgtgaaagcagagaactcagtggccgccaagtcggggggc
tgcttcccgggctcggccacggtgcacctggagcagggcggcacgaagctggtgaaggac
ctgagccccggggatcgggtgctggcggccgacgaccagggccgcctactctacagcgac
ttcttggccttcttggaccgggaggacggcgccaagaaggtgttctacgtgatcgagact
agggagccccgagagcgcctgctgctcaccgccgcccacctggtcttcgtggctccgcac
aacgactcgggtccggagccgctgcccccgggggagccgtcggactgggcatggcaaagg
ccgccgcctggggtagcggccggacgccagtcgctcttcgccagccgggtccgacctgga
cagcgggtctacgtggtggaggagcggggcggtgaccggaggctgctgcccgccgctgtg
cacagcgtgtccctgcgcgaagaggccacgggagtttacgcgcccctcaccgcgcagggc
accatcctcatcaaccgcgtgctggcttcttgctacgccgtcatcgaggagcacagctgg
gcgcactgggcgttcgcccccttccgactggcccacgccctactggcagtgctctccccc
acgggcagggactgtggcgggggcggcggcggccccggcgggggcggcggcggccctctc
ctcctgcccgcagcctcgccagatgtgcccgacgctccagatgccggggccacgacggca
ggcatccactggtactcgcagctgctctaccaaataggcacctggctgttggacagtgac
gcactgcaccccctggggatggcagtcaagtccagctga
DBGET
integrated database retrieval system