Paenibacillus crassostreae: LPB68_02120
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Entry
LPB68_02120 CDS
T05196
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcx03016
]
LPB68_02120
Enzymes [BR:
pcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LPB68_02120
Transfer RNA biogenesis [BR:
pcx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LPB68_02120
Prokaryotic type
LPB68_02120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AOZ91119
UniProt:
A0A167DS76
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All DBs
Position
complement(450314..451240)
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AA seq
308 aa
AA seq
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MELLFLGTNAGVPSLQRNVTAIALRLLEERRSFWLFDCGEATQHQILKSPLKLSKLEKIF
ITHLHGDHIFGLPGLLASRSNQGGKSPLTIYGPLGIKKFIETTMNLSQSRMDYVLDIVEH
DGGMIFEDETFAVYSEMLEHRIQCYGYRVIEKDRNGSLNLPLLQSYGLKPGPDYGKIKRG
ESIVLENGQVIRPEDVLGAPKKGLIVTILGDTRPCPSVINLAKHADVLVHEATFLNEMVD
TAYEYYHSTALQAATAGRQAEVKHLILTHFSSRYKDMEQLDKVLAEAQSVFPNTSLAEEF
IIYPIERS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctatttctaggtaccaatgcgggagttccatctttacagaggaatgtaacg
gcgattgcgcttcgtctattagaggaaagacgttctttctggttgtttgattgtggagaa
gcgacacaacatcaaatcttaaagtctccattaaaactaagtaaactcgagaagattttc
attacacatttacatggtgatcatatatttggtctacctgggttgcttgcaagtcgaagt
aatcaaggtggtaaatctccattaactatttatggtcctcttgggattaagaaattcata
gaaaccacgatgaaccttagccaatctaggatggattatgtacttgacatagtggagcat
gatgggggtatgatctttgaagacgagacattcgctgtctattctgaaatgctagagcat
cgtatccaatgttatggatatcgtgtcatagaaaaagatcgaaatggtagtcttaatcta
ccgttattacaatcctatggattaaaacctgggccagattatgggaaaatcaaacgtggt
gagagtattgtactggagaatggccaagtgatacggcctgaagacgttttgggagctccc
aaaaagggtctgattgtaactattttgggtgatactcgaccttgtccttccgtgatcaat
ttagcgaagcatgcagatgtacttgtacacgaagcaacctttcttaatgaaatggttgat
acagcgtatgaatattatcatagtaccgcattacaagcagcaacagcaggacggcaggca
gaagttaagcatttgattcttacgcattttagttctcgctataaagatatggagcaactg
gataaagttcttgctgaagcccaatctgtgtttccgaatacgagcctagcagaggaattt
atcatatatcctattgaacgaagttga
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