Paenibacillus crassostreae: LPB68_02230
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Entry
LPB68_02230 CDS
T05196
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB68_02230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_02230
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LPB68_02230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
Rad17
AAA_14
Cactin_mid
ATPase_2
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AOZ91140
UniProt:
A0A167DRP9
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Position
complement(474747..477377)
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AA seq
876 aa
AA seq
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MTQYTPMIEQYLQVKQQAQDAFLFFRLGDFYEMFFDDAILASRELEITLTGRGGGGDEKI
PMCGVPYHAAEGYIQRLIEKGYKVAICEQLEDPTTTKGMVHRDIVRVVTPGTFMDGKNIA
DKSNNYLVCVTTSGGMMSLSACDLSTGELYVTSVPSSLEWLRDEINIYEPSEIIGDEGMI
ESIRSLQLQGNRPVMYTPWDKKEEKLVRSQFGEAAWARLEQERGVCISVLISYLNETQRR
SLGQLTQISSYEPGHYMILDPFTRRNLELVETVRDRSKKGSLLWLLDKTETSMGARLLRR
RIDKPLLHRSRIEERLEAVELLYNQLILREDLRHSLSEIYDLERLVGRIAYGNANGRDLT
ALKMSLRQIPALKELCAVSSSTTLSKIANELDPCVDLHDAIEQAIVDEPPISVRDGGLIK
PGYHAHLDELREASTNGKRWIAELEAQERVATGIKSLKIGFNKVFGYYIEITKSNIGSLP
EGRYERKQTLANAERYVTPELKEKEGLILEAQEKMVDLEYTLFTELRETLNTQIQRLQSL
AEKVAELDVYQSLAAISVEHGFVKPILTDNYDLVIEGGRHPVVEAVMKDSSFIANATELS
KESANILLITGPNMAGKSTYMRQVALISIMAQMGCFVPANVAEIPMVDRIFTRIGAADDL
IGGQSTFMVEMADIQVMTEKATSRSLIIIDELGRGTSTSEGMAIAQAVIEFVHDKIGCKA
LVSTHFHELSHLEESLQGLRNYSMSVQEAGDKVHFLRKLIPGAAGSSYGIYCARLAGLPE
SIIDRANILLDNLEQIPSLVAVSAEAERGVIRESSEVVQLSIFAEEDLKPKKKEAAPINP
SITQIIESVKNVDLMNMTPLQAMQILHDLHVKAKGV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtatacgccaatgatcgaacaatatttgcaagtgaaacaacaagcccaagat
gcctttttattttttcgtctaggggatttttatgaaatgttctttgatgacgccatcctt
gcctcacgcgaacttgagattacactaacgggtcgcggtggtgggggagatgagaaaatc
ccaatgtgtggtgtaccatatcatgcggccgagggctacatccaacgattgattgaaaaa
ggatataaagtagccatatgtgagcaacttgaggatcctacaacgactaaaggaatggta
caccgtgatatcgttcgagttgtgactcctggaacattcatggatggtaagaacattgcg
gacaaatcgaataattatttagtctgcgtaacaacttcaggtgggatgatgagcttatct
gcttgtgatctgtcaacgggtgaactctatgtcacatctgtcccatcttcactggaatgg
ttacgcgatgagattaacatatatgaaccttctgagattattggtgatgaaggcatgata
gagagcattcgctcgctacagttacaaggtaatagacctgtgatgtatacgccttgggat
aaaaaagaagagaaattggtcagaagtcaatttggtgaagcagcatgggctcgtctggaa
caagagcgtggtgtatgtatatctgtattgatctcttatcttaatgagacacaacgtcgt
tcattaggtcaattaacacagatctcttcttatgaaccgggacattatatgatattggat
ccatttacacgtcgtaatctggaacttgttgaaactgtacgcgaccgatcgaagaaaggg
tcattactatggcttttagataaaacagagacttcgatgggtgcacgtctactgcgacga
cgcatagataaaccactcttacaccgcagtcggattgaagagagactggaagctgttgag
cttctatataatcaactcatattacgtgaggatttacgtcattctctaagtgaaatctat
gatctagaacgacttgttggcagaatagcttatggtaatgctaacgggcgcgatcttacg
gctcttaagatgtcattaagacagattccagcgctgaaagagttgtgtgctgtatcatca
tcaacaacattaagtaagattgctaatgaactagatccctgtgttgatcttcatgatgcg
attgaacaagctattgtagatgaaccacctatttctgttcgtgatggtggtttaattaaa
ccaggatatcatgcgcatttggacgagctacgcgaggcaagtaccaatggaaaaagatgg
attgcggagctagaagcacaagaacgagttgcgacaggaatcaagtcactgaagattgga
ttcaataaagtatttggatattatattgaaattacaaagtctaatattggctcattaccg
gaaggtagatatgaacgtaagcagacgcttgctaatgccgaacgatatgtcactcctgaa
ttgaaagagaaagaaggcctgattctcgaagctcaggagaaaatggttgatctagaatat
actctctttactgaactcagggagacattaaatacgcagatccaacgattacaatcactc
gcagaaaaagtagcggaactggacgtataccagtcattagctgcgataagtgttgaacat
ggctttgtgaagccaattctgacagataactacgatctagtcattgaaggaggacgtcat
ccagttgtcgaggctgtgatgaaggattcttcttttatcgcgaatgcaacggaattatcg
aaagagtcagcaaatatattactgattacaggcccgaatatggctgggaaaagtacgtat
atgcgacaagtggctctaatctcgattatggctcaaatgggatgtttcgttcctgcgaat
gtagctgaaatcccaatggtagatcgtatattcacaagaattggtgctgccgacgatctg
attggcggtcaaagtacttttatggttgaaatggcagatattcaagtgatgactgagaaa
gcaacttcacgtagtctgatcattatcgatgaattaggtcgtgggacatccacgagtgaa
gggatggctattgcgcaagccgttatagaatttgtgcatgacaagataggatgtaaggct
ttagtatcaactcacttccatgaattatcccatctggaagaaagcttgcaaggcttacgt
aactattctatgagcgtgcaagaggcaggagataaagttcatttccttcgcaaattaatt
ccaggtgctgcgggaagtagttatgggatttactgtgcacgtctagctggattgccagaa
tcaatcattgatcgcgccaatattttacttgataatttggaacaaattccttcgcttgtg
gcagtgagtgcagaggcagaacgaggagttataagggaaagtagcgaagttgttcaatta
tctatatttgccgaagaggatttgaagcctaagaaaaaagaggcagctccgatcaatcct
tctataacccaaattatcgaatctgtcaaaaatgttgaccttatgaatatgacaccttta
caagcgatgcaaatactgcatgatcttcatgtaaaagctaaaggggtttaa
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