Paenibacillus crassostreae: LPB68_03580
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Entry
LPB68_03580 CDS
T05196
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcx03032
]
LPB68_03580
03036 Chromosome and associated proteins [BR:
pcx03036
]
LPB68_03580
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_03580
DNA replication proteins [BR:
pcx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LPB68_03580
Chromosome and associated proteins [BR:
pcx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LPB68_03580
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LPB68_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
Rpf1_C
ANAPC5
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AOZ91377
UniProt:
A0A167DJT8
LinkDB
All DBs
Position
complement(748036..748308)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELISQVAETSELSKKDATKAVDAVFEAISVALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIAASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggaattgatttcccaagtagctgaaacatcggaattatcgaagaaggat
gctacaaaagcagtagatgctgtattcgaagcgatttccgtagcgctacaaaatggcgac
aaagtgcaacttgtaggattcgggaactttgaagtgcgtgaacgttctgcacgtaaagga
cgtaatccacaaacaggtgaagaaatcgaaatcgctgcgagcaaaatccctgcattcaaa
ccaggtaaagcgcttaaagacggaattaaataa
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