Paenibacillus crassostreae: LPB68_04335
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Entry
LPB68_04335 CDS
T05196
Symbol
polYB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_04335 (polYB)
Enzymes [BR:
pcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB68_04335 (polYB)
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
LPB68_04335 (polYB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
CsrA
Motif
Other DBs
NCBI-ProteinID:
AOZ91515
UniProt:
A0A167DG16
LinkDB
All DBs
Position
887427..888695
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AA seq
422 aa
AA seq
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MRGKGERIIFLADCQSFYASVEKADHPQYKDRPVAVAGDPARRSGIILAACPIAKSYGVT
SAERLGEALNKCPDLVVMRPRMQHYIDISLMITQIYQGYTDLVEIFSIDEQFLDVTGSLR
MFGDPITIAQSIQRKVLQQTGVKVRIGISSNKVLSKIATDIWAKKNENGIFTLPKSEIET
LLWPQSVNKMFGVGSRMTAHFARLGMHTIGDIARTPLPRLKERFRARFGKQSDIQAEVMW
RTANGLDDSPVTPGTFNTAPKSVGHMITLPSDYTEIDQVNTILLELTEEVCRDCRRKGYM
GSVISVSCMCSPYEDPTGFSRQMKMPDPTNNTNIVYEAAKTLFYRYWNTLPVRRIGLTLS
NFVSDQEYQLTLFDDQIKTRALDKATDIIKDRYGSAAIIRASSLTPSGQAIERSHKIGGH
YK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcaaaggtgaacggatcatatttctagcagattgccagagcttctacgctagt
gtagaaaaagcggatcatccccaatacaaggatagacccgtagcggtggccggggatccc
gcacgtcgctcaggtattattctagcagcctgtcctatagccaagagctacggagtaacg
tcagccgaacggctgggtgaagccttgaataaatgtccggatctagttgtcatgcgaccc
agaatgcaacattatattgatatctcactcatgatcacacaaatttaccaagggtatact
gatctcgttgagattttctccattgatgaacaatttcttgatgtcacagggagtctacgg
atgttcggagatccaattacgatagctcaatccatacagcgtaaggttctccaacagaca
ggagtaaaagtgcggataggtattagctcgaataaagtactgtccaagattgcaacggat
atttgggcgaaaaagaacgagaatggcatcttcaccttacctaagtccgagattgagacc
ttattatggccgcaatctgtaaacaaaatgttcggtgtaggatcccgcatgacagctcac
ttcgcacgtctcgggatgcataccatcggggatatcgctagaacccccttacctcgatta
aaagaacgatttcgagcccgattcggtaaacaaagtgacattcaagccgaagtcatgtgg
agaacagctaacggattggatgactctcctgttacaccaggtacatttaacacagcaccc
aaatccgtcggacatatgatcaccctccctagcgattatactgagatcgatcaagtgaat
accatactgcttgaactcacagaagaagtatgtcgcgactgtcgccgcaaaggatatatg
ggttccgttatttcagtgagttgcatgtgtagtccttatgaagatcctacaggcttctca
cgacaaatgaagatgcctgatcctaccaataatacgaacatcgtctatgaagcagctaag
acacttttttaccgatactggaacacacttccggtaaggcgaattggtctaacccttagc
aattttgtatccgatcaagaatatcagctgactctgtttgatgatcagatcaaaactcga
gcgttagacaaagccactgatatcatcaaagaccgttatggtagtgccgcgatcatcaga
gcatcatcattaacaccttcaggccaagcaatagaacgatcgcacaaaatcggaggtcat
tataaatga
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