Paenibacillus crassostreae: LPB68_05540
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Entry
LPB68_05540 CDS
T05196
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_05540
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB68_05540
Archaeal homologous recombinant proteins
LPB68_05540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Metallophos_3
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AOZ91732
UniProt:
A0A167C2D6
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All DBs
Position
complement(1117491..1118672)
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AA seq
393 aa
AA seq
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MRILHTGDWHFGRTLEGRSRLREQEDFVDELVRMADDQQADLILMAGDVYDSVNPPAAAE
QLFYEACARLTEGGRPFVAIAGNHDQPERVSSVSPLVTRQGITLVGLPMANAVTVHAPRT
GEIAKIAALPYPSEARLNELLVVEGNEDDLRQAYSARVGKLMEMLARGFTPNTINLAMSH
IYVLGGLETDSERPIQVGGAYTVDPSALSIGAQYTALGHLHRSQAVKGEGMTRYSGSPLA
YSFSEAGQAKSVAMLDISPGQQPIFEELYLSCGRPLVRWRAKGGIEEVYRWLDEDLDARA
FIDLEITLNDALSLGEIQRLRKSREGLVHIRPIYPEMEVAEMEIQRSQLPLHEIFRKFYQ
RQTGGAEPDDGLVQLFLELVEENTTVQEEGDNE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatattgcataccggtgattggcattttggtcgtacattagagggtcgaagtcgg
ctgagagagcaagaggatttcgttgatgagttggtgcgaatggctgatgatcaacaagca
gatctgatattaatggctggagatgtttatgattctgtgaatcctccggcagcggcagag
caactattctatgaggcttgcgctaggctaacagagggtgggagaccttttgtcgcaatt
gcaggtaatcatgatcaacctgagcgagtatcttccgtatccccattagtaactcgacaa
gggattacattagttggacttcctatggcgaatgcagtgaccgtccatgcacctcgaacg
ggggagatagccaaaatcgcagcacttccttatccatccgaagctcgactaaatgaacta
ttagtcgtagaagggaatgaggatgatctacgccaagcatatagtgcacgtgttggtaaa
ttgatggagatgttggctcgtggatttacaccgaatacaattaatttggcgatgagtcat
atatacgtgctagggggcttggaaacagactcagagcgtcctatacaggttggaggtgcc
tatactgtcgacccatctgctctttcaataggagctcaatatacagcgctaggacatctt
catagatcgcaggctgtgaaaggggaagggatgactcgttatagtggatccccacttgcc
tatagtttttctgaagcagggcaagcgaaatctgttgccatgctggatatctcaccaggt
caacaaccaatttttgaagaattatatctatcatgtggacggccattagttcgttggagg
gctaagggaggcatagaagaagtgtatcgttggttggatgaggatctagatgctcgtgct
tttatagatttggaaatcactctaaatgatgcgttgtctcttggagagattcagagactg
cgcaagagccgggaagggttagtgcacattcgacctatttacccggaaatggaagttgca
gaaatggagatccagcgttcgcaattaccattacatgagatattccgtaagttctatcag
cgccagacaggaggagcagagcctgatgatgggcttgtacaattgttcctcgagcttgta
gaagagaataccaccgtacaggaagaaggggataatgaatga
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