Paenibacillus crassostreae: LPB68_05660
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Entry
LPB68_05660 CDS
T05196
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03030
DNA replication
pcx03430
Mismatch repair
pcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB68_05660
03430 Mismatch repair
LPB68_05660
03440 Homologous recombination
LPB68_05660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcx03032
]
LPB68_05660
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_05660
Enzymes [BR:
pcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB68_05660
DNA replication proteins [BR:
pcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB68_05660
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB68_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AOZ91756
UniProt:
A0A167C1L7
LinkDB
All DBs
Position
complement(1148235..1149254)
Genome browser
AA seq
339 aa
AA seq
DB search
MDIKAATKAIKHGDVSPVYLLYGLEKYQIKEFTTLLVDELIQKEDRDFALVNYDLSESSI
QDVIEEAETLPFMVPRKLIFVRDASVFTAGKEGGKIEHRIEALLEYLKNPAEYSILIFLV
HHEKLDERKKVVKALNSAGIVLSFSPLGGHELIGWIERESKQRGCILATGAADILIRNAG
AQLQNLSAELDKLCLYVGAGGTIDSNTVEQLVSRSTEQNVFALVENMANLRLEEALSIYY
ELLKQREEPIKIAALITRQFRIILQVKELMGQSYSQAQIASQLGLHPYAVKIAGEQARKY
KPDVLKSILSRLTDLDYQMKTGRIDKVLGLELFLLRLAV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaagcagcgacgaaagcgatcaaacatggagatgtatctcctgtatatcta
ctttatggattagagaaataccaaataaaagagttcactaccttattggtggatgaatta
attcaaaaagaagacagagattttgctcttgtgaattatgatttaagtgaaagttccata
caggatgtaattgaggaagcagaaacactgccttttatggtaccgcgcaagttgattttt
gtccgagatgcctctgttttcacagctggtaaagaaggcggtaagattgaacatcggatt
gaggcacttttggaatatttgaaaaatcctgcagaatacagcattttaatatttctggtg
catcatgaaaagttagacgagcgaaaaaaagtagtcaaggcgctgaattctgcaggtata
gtgctctccttttctccgttaggcggtcacgagttaattgggtggattgagagagagtcg
aagcaaagagggtgtatattggctacaggagccgctgacatccttatcagaaacgcaggt
gcgcagttgcagaacttatctgctgagctagacaagctttgcttatatgtaggtgctggt
ggcacgatagattctaatactgtggagcagttagtctctcgtagtacagaacagaatgtg
tttgctctggttgagaatatggctaatttgagattagaagaagcgcttagtatctattat
gaattactgaagcaacgggaagagcctatcaaaattgcagcattaataacaagacagttt
cggatcattctacaagtgaaggaattaatgggccaaagctattcgcaagctcaaattgca
tcacaacttggacttcatccttatgcggtcaagatagcgggtgaacaggcacgaaaatac
aagccggatgttctgaagtctattttgagcagactgacagatttagattaccaaatgaag
acaggaagaatagataaagtacttggactagaactatttctgctacgactggctgtctaa
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