Paenibacillus crassostreae: LPB68_07480
Help
Entry
LPB68_07480 CDS
T05196
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcx03009
]
LPB68_07480
Enzymes [BR:
pcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LPB68_07480
Ribosome biogenesis [BR:
pcx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LPB68_07480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
TGS
Motif
Other DBs
NCBI-ProteinID:
AOZ92078
UniProt:
A0A167GTF1
LinkDB
All DBs
Position
complement(1560033..1561016)
Genome browser
AA seq
327 aa
AA seq
DB search
MSQYYNPITHVVTIEEDGWILKKLLQKKLNISRKLLSRLKYTEKGIMVNGERVYISVPVR
NGDVVEIRMEQESSEDILPQAIPFEIVFEDDHLLVVNKEAGRIVHPTHGHYVDTLANGVV
HYWLEQGKAYRFRPVHRLDRETTGVLVIAKNPYVHQHISEQMIAGTVDKNYLALVHNIPS
LSEGLIDGPIDRDPTEPHRRIVTPTGYSSLTRYWLLEKYQQASLVRLKLESGRTHQIRVH
MTSIGCPLIGDSFYRHPIYNMLDIELEDHCDDEVVILDRSIGRQALHAYELTFIHPILHE
SMTFTAPLPLDMEILRNQLRGDSIKEE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatattataatccaattacacacgtagttaccattgaagaagacggatggatc
ctaaaaaaactattacagaaaaagttaaacatttcccgtaaattgctatcaaggttgaaa
tataccgagaagggaatcatggtgaacggggagagagtttatattagcgtacccgtaagg
aatggggatgtggttgaaattcggatggagcaggaatcttcagaagatatcctgccacag
gctattccatttgaaattgtatttgaggacgatcatttattagttgtgaataaagaagct
gggagaattgtacaccctacgcatggtcattatgtggatacgcttgcgaatggagttgtt
cattattggctagagcaagggaaggcatatcgcttccgacccgttcatagattggatcga
gagacaaccggggtcttggtgattgcgaagaatccatatgtgcatcagcatatatctgag
cagatgatcgcaggtacagtggataagaactacttagcattagttcataatattccaagt
ctctctgagggattgatcgatggtcctattgatagagatcctacagaacctcatcggaga
atcgttacgccaacaggttatagttctctgacacggtattggttattagagaaatatcaa
caagcaagtttggttcgattgaagttagaaagtggtcgaactcatcagatccgtgttcat
atgacctcgattggatgtccattgattggagattcattttatcggcatcctatctacaat
atgcttgatatcgaactggaagatcattgtgatgatgaagtagtgatactggataggagt
atagggcgtcaggcattacatgcatatgaattaacatttatacatcctattctgcatgag
tcaatgacctttactgcaccactaccattggatatggaaatacttcgtaatcagttacgt
ggtgattcgattaaggaggaataa
DBGET
integrated database retrieval system
