Paenibacillus crassostreae: LPB68_08680
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Entry
LPB68_08680 CDS
T05196
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB68_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcx03019
]
LPB68_08680
03110 Chaperones and folding catalysts [BR:
pcx03110
]
LPB68_08680
03029 Mitochondrial biogenesis [BR:
pcx03029
]
LPB68_08680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcx04147
]
LPB68_08680
Enzymes [BR:
pcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LPB68_08680
Messenger RNA biogenesis [BR:
pcx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LPB68_08680
Chaperones and folding catalysts [BR:
pcx03110
]
Heat shock proteins
HSP60 / Chaperonin
LPB68_08680
Mitochondrial biogenesis [BR:
pcx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LPB68_08680
Exosome [BR:
pcx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LPB68_08680
Exosomal proteins of other body fluids (saliva and urine)
LPB68_08680
Exosomal proteins of breast cancer cells
LPB68_08680
Exosomal proteins of colorectal cancer cells
LPB68_08680
Exosomal proteins of bladder cancer cells
LPB68_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AOZ92294
UniProt:
A0A167AH12
LinkDB
All DBs
Position
complement(1829192..1830820)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIRFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIE
KAVKAAVIELKNIAKPIEGKQSIAQVASISAADEEVGELIAEAMEKVGNDGVITVEESRG
FATEMEVVEGMQFDRGYISPYMITDTDKMEAILDNPYILITDKKISSTQEILPLLEKIVQ
QAKPLVIIAEDIEGEAQAMLVVNKLRGTFNAVAVKAPGFGDRRKAMLQDIAALTGGQVIT
EELGLDLKTATVEQLGTARQVRVTKENTIIVDGAGNKADIDARVNQIRSQLEDTTSEFDK
EKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGTALVNV
YNAVNAVDVTGDERTGVNIVLRALEEPIRTIAANAGQEGSVIVERLKKEAIGIGYNAATD
EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKAGMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattagatttagtgaagatgctcgtcgctctatgcttcgcggtgttgat
gctttggcaaacgctgtaaaggttactttgggacctaaaggtcgtaacgtagttcttgag
aagaaattcggtagcccgcttattactaatgacggtgttacgattgcgaaagaaatcgaa
ttggaagatgcttttgagaacatgggtgcacaacttgttaaagaagtagctaccaagaca
aatgatgttgctggtgacggtacaactacagctacagttcttgctcaagcgatgattcgt
gaaggtcttaagaacgtaactgcgggtgctaacccaatggttattcgtaaagggatcgag
aaggctgttaaagcagctgtaatcgaacttaagaacattgctaagccaatcgaaggcaaa
caatccattgcacaagttgcatctatctctgctgctgacgaagaagtaggcgaattgatt
gctgaagctatggaaaaggtaggaaacgatggtgttatcactgttgaagaatctcgtgga
ttcgcaactgaaatggaagtcgtggaaggtatgcaattcgaccgcggatacatttctcca
tacatgattacagatacggataaaatggaagcaattcttgataatccatacatcctaatc
acagataagaaaatctccagcacacaagaaatcttgccattgcttgagaaaatcgttcaa
caagctaaaccacttgtaattattgctgaagatatcgaaggcgaagcacaagctatgctg
gtagtgaacaaattgcgtggaacattcaacgcagtagctgttaaagctccaggattcggt
gatcgtcgtaaagcaatgcttcaagatatcgctgcattgacaggcggacaagtgattaca
gaagaacttggtcttgatctgaaaacagcaacagttgaacaattgggaactgctcgtcaa
gtgcgtgtaaccaaagaaaacacaattatcgtagacggtgctggtaacaaggctgatatc
gatgctcgtgttaaccaaattagatctcagttggaagatactacttccgagttcgacaaa
gagaaattgcaagaacgtctagctaaattgtctggcggagttgcagtaatcaaagttgga
gctgctactgaaacagaattgaaagaacgcaaactacgtatcgaagatgccttgaacgca
actcgcgctgcagttgaagaaggtatcgtatccggtggtggtactgcactcgtgaacgta
tataatgcagtaaatgctgtagacgtgactggtgacgaaagaacaggcgtgaacatcgta
ttacgcgctcttgaagaaccaattcgcacaatcgcagctaatgctggtcaagaaggttcc
gttatcgtggaacgcttgaagaaagaagctatcggaatcggctataacgctgctactgat
gaatgggtgaacatgttcgaagctgggatcgttgaccctgctaaagtaactcgttcagct
cttcagaacgctgcatctgtagctgcaatgttcttgactactgaagcagttattgctgac
aagccagaaccagaaaaagcaggcatgcctgatatgggcggcatgggtggtatgggcggc
atgatgtaa
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integrated database retrieval system
