Paenibacillus crassostreae: LPB68_09500
Help
Entry
LPB68_09500 CDS
T05196
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03420
Nucleotide excision repair
pcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB68_09500
03430 Mismatch repair
LPB68_09500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_09500
Enzymes [BR:
pcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB68_09500
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB68_09500
MMR (mismatch excision repair)
Other MMR factors
LPB68_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOZ92444
UniProt:
A0A167BSG8
LinkDB
All DBs
Position
2020564..2022654
Genome browser
AA seq
696 aa
AA seq
DB search
MHQPTLQYQSHPPGVPITTPLPQTPSAPTTTSKELVQPAVEDAFYFRALEEEGILLNGPQ
IDAVRHGHGPLLTLAGAGCGKTTVLAARTGYLIAVRGVPASQILLVTFTSKAAAEIKARI
ANIPCITPLAARSVQARTFHSFGLAVLRQSGQREQILSDFSTRHTIMKIILRRLKVGETY
QPETLLAALSSWKMNGEWPTDLPSDTAEELKIKKIMLAYEEWKQGRNQWDFDDILLHTTK
LLNDPSRLTELQSRFSYLMVDEFQDTNTVQYDIVRKLSAGHRNLMVVGDDDQTIYSFNGA
RQESVLQFDQVYPDATIISLPINYRSDSRILGLGTALIAHNVFRRNKQLVAAGSKGNPPY
YASPMSVEEEASFVVDHIEEQVRLGEISYSDIAILHRTAGSSRSVLEQLLIRGIPFVQYG
NNTVFYDQTIIKTLMDHLRLSLDPRCKEAFQSTLGPLYISREEGLNYLMEQERKQSKKYP
LIHLSHWDRLQPFQQAAVKERIRLIKKLTSLKPVYAIREMRRIFYDKYLEAGDPLLHTQY
KETLTDSLDELESAAERFSTVEQFIAHADELTLRHQQMEDMRDGNAGHAVQLLTIHRAKG
MEFRQVYWIGASEGILPHSTVLKEKIPQEMKATHPQTAESKLAQAAIEEERRLAYVAVTR
AKESLYITSPSHYHGKAVEPSRFILEAFGVIRKHSS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcaacccactcttcaatatcagtcacatccgcccggcgtgcccattaccacacca
ttaccacagaccccatctgctccaactacaacaagtaaagaactcgttcaaccagccgtg
gaggatgcgttctacttccgtgcactggaggaagaagggattcttctaaatggaccacaa
attgacgctgttcgtcacggtcatggaccattactcacacttgctggagctggttgtggc
aaaacaaccgtcttggccgcacgtaccggttatttaattgctgttcgtggtgttcctgct
tcacaaatattattagttacattcacgagcaaagcagcagcagaaattaaagcccgtatc
gctaatataccttgtattacacccttagcagcacgctctgtacaagcacgaaccttccat
tcatttgggttagcagtattacgtcaatcgggtcaacgagaacaaatcctcagtgatttc
tcaactagacatacgattatgaaaatcatattacgtcgcctgaaagtaggagagacttat
caacctgagacactcttagccgcactctcctcttggaaaatgaatggtgaatggcctact
gatcttccttctgatacagctgaagaattaaagatcaagaagattatgctggcctatgaa
gaatggaaacaaggacgtaatcaatgggatttcgatgatatattgttacacacaacaaaa
ttattgaatgatccttctcgactaaccgaactacaatcaagattcagctatttgatggtc
gatgagtttcaggatacgaatacagtacaatatgatatcgtacggaagttatctgcaggg
catcgcaatcttatggtcgtaggcgatgatgaccagacgatctattcttttaatggtgca
cgacaagaatctgttctgcaattcgatcaagtctacccagacgccaccattatttcactt
cccatcaactatcgaagcgattcgcggattctcggtctaggaacagcactcatcgctcac
aatgtattccgccgaaacaagcaactagtcgctgcaggatctaaaggtaatccaccctac
tatgcatctcctatgagcgtggaggaagaagcctcctttgttgttgatcatatagaagaa
caagtacgacttggagagatctcctattctgatattgctattctccatcgaactgctggt
agtagtcgttccgtattagaacaattattaattcgcggaatcccttttgtccaatatggc
aacaataccgtcttttatgatcagaccatcattaagacgttaatggatcatcttcgatta
tcactcgatccgcgttgtaaagaagcctttcagagtacacttggtccactttatatttct
cgtgaagagggacttaattatttgatggaacaagagaggaaacaatcaaagaaataccct
ctcattcacctctcgcattgggatcgtcttcagccattccaacaggcagccgttaaagag
cgaatccgattgatcaagaagctaacatcactcaaacctgtatacgcaattcgagaaatg
agaagaatcttttatgataagtatttagaggctggagatccacttcttcacacccaatat
aaagagacacttaccgatagcttggatgaacttgagagtgctgctgaacgatttagtacg
gtcgagcaattcatagctcatgctgatgagttaactttacgacatcaacaaatggaggat
atgcgtgatggcaatgcaggtcatgcagtacaattactaaccatccaccgtgctaaaggg
atggaattccgtcaagtctattggattggcgccagcgagggaattcttcctcatagtaca
gtgctcaaagagaagatcccgcaagaaatgaaagctactcacccacagacagctgaatcc
aagctcgctcaagctgcgattgaggaggaacgtcgtttagcatatgtagctgtaaccaga
gccaaggaatccttatatatcacctcaccaagccattatcacggcaaagcggttgagcca
tctcgattcatattggaagcctttggggtgatacgcaagcattctagttga
DBGET
integrated database retrieval system
