Paenibacillus crassostreae: LPB68_09590
Help
Entry
LPB68_09590 CDS
T05196
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx00100
Steroid biosynthesis
pcx00909
Sesquiterpenoid and triterpenoid biosynthesis
pcx01100
Metabolic pathways
pcx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
LPB68_09590
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
LPB68_09590
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcx01006
]
LPB68_09590
Enzymes [BR:
pcx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
LPB68_09590
Prenyltransferases [BR:
pcx01006
]
Terpene biosynthesis
Squalene/phytoene synthase
LPB68_09590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Scabin-like
RE_Alw26IDE
Motif
Other DBs
NCBI-ProteinID:
AOZ92461
UniProt:
A0A167BSW0
LinkDB
All DBs
Position
complement(2042236..2043051)
Genome browser
AA seq
271 aa
AA seq
DB search
MQANAALLKDANKVLAQTSRTFIIPISHLGAGLQEAVTAGYLSMRAIDEIEDHEKLPRED
KISLLLSIASLLKTDYVEEEFTSLLQPYNKDLPEVSLRLTDWIKLAPTQTKEVICRYTST
MSQGMAEWVSKNWNIQNKEDLDDYTYYVAGLVGVMLSDLWTMYGERDVAKEQSVAFGRGL
QLVNIISNRAEDSERGVNFHPPGWNFDEMLAYARQNLEIAEDYTSRIKLDPIYNFCKIPL
ALAHGTLDAIVAGKSKLNRIAVLKIVSGAVR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcgaatgcggcattactaaaagacgctaataaagtattagctcaaaccagtaga
acattcattattccaattagccacttaggagcgggacttcaagaagctgtaaccgcaggc
tatcttagcatgagagcgattgatgagattgaagatcatgagaagctcccaagggaggat
aaaatttcactattgctatccatagcttcattattgaaaacggattatgtagaagaagaa
ttcacatcgttattacaaccttacaacaaagatctacctgaagttagtctacgattaaca
gattggattaagctagcaccaacacagaccaaagaagtcatttgtcgctatacttcaaca
atgtcacaaggaatggcagaatgggtatcgaagaattggaatattcagaataaagaggat
ctggatgactatacctattatgtggcaggcttggtaggggttatgctctctgatttgtgg
acaatgtacggagaaagagatgttgctaaggaacagagtgttgcatttggccggggtcta
cagttggttaatatcattagcaatcgtgcagaagattcagaacgtggtgtgaatttccat
ccaccggggtggaattttgatgagatgctagcttatgcgagacagaacttagagattgcc
gaagattatacgagtcgcattaagctagatcctatatataatttctgtaaaatcccgcta
gcattagctcatggaacattagatgctattgttgcaggcaaatctaaacttaatcgtata
gctgtattgaagatagtaagtggggctgttaggtaa
DBGET
integrated database retrieval system
