Paenibacillus crassostreae: LPB68_11515
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Entry
LPB68_11515 CDS
T05196
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcx03009
]
LPB68_11515
Enzymes [BR:
pcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
LPB68_11515
Ribosome biogenesis [BR:
pcx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LPB68_11515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AOZ94678
UniProt:
A0A162KU25
LinkDB
All DBs
Position
complement(2473654..2474355)
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AA seq
233 aa
AA seq
DB search
MRINKFISETGFCSRREADKKVENGEVTINGVLAVLGSQAEDGDDVRINGQPLDSKKRHV
YIALNKPIGITCTTELHIQGNIVDFVGHSERIFPIGRLDKDSEGLILMTNDGDIVNKILR
AEGKHEKEYLVSVDRPITESFVRGMSTGVKILGEMTRPCEVTQLSERKFRIILTEGKNRQ
IRRMCQTFGYEVKDLQRVRIMNVQLGNHKVGTWWDLTPDERQELGSLLNYKLE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaataaataaattcatcagcgagacaggcttctgttctcgtagagaagcagataaa
aaggttgagaatggagaagtaacgattaatggtgtattagctgtactcggtagtcaggct
gaggatggtgatgatgtacgtataaatgggcaaccgttggattctaagaagagacatgtt
tatatcgcccttaataagcctataggtataacttgtacaactgagctacatattcagggc
aatattgttgattttgtaggccattcggagcgaatcttccctattggtagattagataag
gattcagaaggattaatcctaatgacgaatgatggggatattgttaataaaatattacgt
gcagaaggtaaacatgagaaggaatacttagttagtgtagatcgacctattactgaatct
tttgtaagagggatgtccactggtgtaaaaattttaggagagatgacacgtccttgcgaa
gtgacgcagttatcagagcggaaatttcgcattattcttacagaaggaaagaatcggcag
atccggcggatgtgccaaacttttgggtacgaggttaaagatctacaacgtgttcgaatc
atgaatgttcaattaggtaatcataaggttggaacatggtgggatctgacgcctgatgag
aggcaagagcttggatccctgcttaactataaattagagtaa
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