Paenibacillus crassostreae: LPB68_14390
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Entry
LPB68_14390 CDS
T05196
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB68_14390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_14390
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB68_14390
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPB68_14390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
AAA_7
AAA_5
AAA_22
HEM4
CTD6
EAD4
Motif
Other DBs
NCBI-ProteinID:
AOZ93281
UniProt:
A0A167E2P9
LinkDB
All DBs
Position
3154824..3156815
Genome browser
AA seq
663 aa
AA seq
DB search
MSDIVIDNKPFELVSEYTPQGDQPTAITELVEGISQGKREQTLLGATGTGKTFTIAQMIS
KVNRPTLIIAHNKTLAAQLAAEFKEFFPNNSVDYFVSYYDYFQPEAYIPSTDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPREYSDLLLSLRVGMEKPRNEILS
RLVDIQYQRNDLNFVRGTFRVRGDVIEIFPASNGERAVRVELFGDEIEKITEIDVLTGEL
VGVRDHIAIFPASHFVTKEETMKVALVNIERELEERLEVLRDQGKLLEAQRLEQRTRYDI
EMMNEVGFCSGIENYSGPLTFREAGATPYTLMDYFPEDMLVVIDESHVTLPQIRGMYNGD
RARKTMLVDHGFRLPSALDNRPLRFEEFEGKVNQIVYVSATPGPLELERCEIMVQQIIRP
TGLLDPIIDVRPTKGQIDNLIEEINIRIARDERVLVTTLTKKMSEDLTDYLKEIGIKVRY
LHSDIKTLERLAILRDLRLGVFHVLIGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTSGRAARNSEGYVIMYGDKITDSMKKAIDETARRREIQNAFNEKHGITPQTIRKKVRD
VIEATKVAESKSDYLTGDVTKLTKKDRQNVMQRLEAEMKEAAKNLQFERAAELRDALLEL
KSE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattgtgatagacaacaaaccgtttgaactggtatcggaatataccccacaa
ggtgaccagcctacagccataacggaattggtggaagggatctcacagggaaagagagag
cagacattacttggtgcaacaggtacggggaagacattcaccattgcacagatgatctct
aaagtgaatcgtcctaccttaatcattgcacataataaaacattggctgctcagttggca
gcagagttcaaggagttttttcccaataattcggttgattacttcgttagttattacgat
tatttccagcctgaagcctatataccttcgacggatacgtatatcgagaaagattcaagt
attaatgaagaaattgataaacttcgacattccgcgacgagctcattgttcgaacggcgt
gatgtcatcattgttgcgagtgtatcctgtatatacggtctcggatctccacgggagtac
tctgatttgttactatcgttacgtgtggggatggagaaaccacgcaatgagattctaagt
cgtcttgtcgatattcaatatcagcgtaatgatctgaattttgtacgtggaacttttcgg
gtacgcggtgatgtaattgaaatttttccagcttcgaatggggaacgagcggttcgtgtt
gaactattcggtgatgaaattgagaaaattacggagattgacgtattgactggagaatta
gttggtgtcagggatcatattgcaatctttcctgcatcacactttgttacgaaggaagag
acgatgaaggttgcactagtcaacattgagcgcgaacttgaagaacgtctagaggtattg
agggatcaaggcaagctattagaggcgcaacgattagagcaacgaacgcgatatgatatc
gaaatgatgaatgaagtcggcttttgttcagggatagagaactattcaggtcctttaacc
tttcgtgaagcgggtgctacaccatataccttaatggattattttcctgaagatatgctg
gttgttatagatgagtctcacgttacattgccgcagattcgtgggatgtataatggagat
agagcacgtaagacgatgctggtagatcatggatttcgacttccttcagcacttgataac
cgtccattacggttcgaggaattcgaggggaaagtcaatcagattgtctatgtatcggct
acgccaggtccattggaacttgagcgctgcgagatcatggtacaacaaattattcgacct
acgggacttctggatccaatcattgatgtccgcccaaccaagggacagattgataatcta
attgaggagataaatatccgtattgcacgtgacgagagagtacttgtaacgacactgacg
aagaagatgtcggaggatctgacagattatttgaaggaaatcggcattaaggtaaggtat
ctacattccgatattaagaccttagagcgcttggccatacttcgagatttacgacttgga
gtattccatgtgttaattgggattaacttgttgcgagaaggactagatctaccagaagtg
tcgcttgtggctattctggatgcggacaaggaaggattccttcggtctgagcgttctcta
attcagaccagtggccgggcggcgcgtaactctgaaggatatgtcatcatgtatggagac
aagatcacagattcaatgaagaaggcaatcgatgaaacggcacgccgacgcgagattcag
aacgcatttaatgagaagcatggtatcacaccgcagaccattcgtaagaaagttcgtgat
gtgatcgaagcgacgaaagtggctgaatcgaaatcggattatctcacaggggatgtaacg
aagttaacgaagaaagaccgtcagaatgtgatgcagagacttgaagcggagatgaaggaa
gcggcgaagaacctccagttcgaacgagcagcagagttgcgagatgctttattagaatta
aaatcggagtaa
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integrated database retrieval system
