Paenibacillus crassostreae: LPB68_14395
Help
Entry
LPB68_14395 CDS
T05196
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB68_14395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_14395
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB68_14395
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPB68_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
BCA_ABC_TP_C
AAA_22
AAA_25
nSTAND3
DnaJ_CXXCXGXG
cobW
Viral_helicase1
MMR_HSR1
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AOZ93282
UniProt:
A0A162KWG3
LinkDB
All DBs
Position
3156954..3159815
Genome browser
AA seq
953 aa
AA seq
DB search
MAIENIVIKGARVNNLKNIDITIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGHP
HCPTHGIEITSQTVEQMVDRIMQYPEKTKVQLLAPVITGRKGEHKSVFTDIGKQGFVRVR
VDGELRELSEEIELEKNKKHTIEVVVDRIVVKPDVESRLADSIEIALKISDGQLLVDVMG
EEELRFSSNFACSICGFSMDELSPRMFSFNSPFGACPDCDGLGAKMIVDQDLLIPDMSKS
IEDGAFLAWTGSTSNYYPQFLKSVCEHFNIPQNVPVSELTTEQMDKLLHGTGDQKIRFKY
ENDFGQRKEAMVVFEGIIPNLERRYRETASDGIRDFIEGFMSAKPCEGCKGKRLKKEILA
VTVDTHNIAYVTSLSIGEAMKLFDNLKLSEKETTIANMILKEINSRLGFLANVGLEYLSL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNERLIETLVHMRDMGNT
LIVVEHDEDTMMAADYLIDIGPGAGIHGGQVIAEGTPQEIMEHPDSLTGQYLSGRKFIPV
NTKRRKPEDRWIEIKGAKENNLKNLNVKIPLGVFTAVTGVSGSGKSTLINEILYKRLARD
LNRAVKVRPGQHKEILGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDIYSQTNEA
KIRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCKGNRYNRETLEVKYK
GKSIAEVLAMTIEDATEFFVNVPRIHRKLQTLLDVGLGYVLMGQPATTLSGGEAQRVKLA
SELYRRSTGKTMYILDEPTTGLHVDDISRLLTVLHRLVDSGESVLVIEHNLDVIKTADYI
IDLGPEGGSGGGTIIATGTPEQIIKVEQSYTGRYLKPVLERDTARSESLSIPI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagagaatattgttataaaaggtgcgagagtgaataatcttaagaatatagat
atcacaattccgagagaccggtttgtcgtactcacaggtctgagtggctcagggaagtct
tccttagcatttgatacgatttatgcagaaggacaacgtcggtatgtcgaatcactttct
gcatatgcgcgtcaattcctgggtcaaatggagaaacctgatgtggattctatagagggg
ctatcaccagcgatatcgattgatcagaagacaacgagtcgtaacccgcgctcaactgta
ggaacagtgacagagatctatgattatctgcgcttgctatatgcacgtgttgggcatcct
cattgtccaacacatggaatcgagattacgtcacagactgtggaacagatggtggatcga
attatgcagtatccagagaagacaaaggtgcagttacttgcacctgtgatcactggacgc
aaaggcgaacacaagagtgtatttacggatattggcaagcaaggatttgtacgcgttaga
gtagacggtgaacttcgtgaactatctgaagaaatcgagcttgagaagaataagaagcat
acgattgaagtcgtagtggatcgaattgtcgtcaagccggatgtggaatctcgcttagcc
gattcaatagagatagcattgaaaatatccgatggacagctattagtagatgttatgggt
gaggaagaactacggttcagttcgaactttgcctgttcaatttgtggctttagtatggat
gagctgtctccacggatgttctctttcaacagtccattcggagcttgtcctgattgtgat
ggattaggtgcgaagatgatcgtggatcaggatttactcattcctgatatgagtaaatct
atagaagatggcgcattcttagcttggacggggagtacatcgaattattatccgcaattt
ctgaaatcggtgtgcgaacatttcaacattccacagaatgttccagtaagtgaactaacg
acagaacaaatggataagttattgcatgggacaggagatcagaagattcgcttcaaatat
gagaatgacttcgggcaacgtaaagaagctatggtcgtgtttgaaggtatcattccgaat
ctagaacgtcgctatcgcgagacagcctccgatggtattcgtgattttatagaaggtttc
atgagcgctaagccttgcgagggctgtaaaggtaaacgtttgaagaaagaaatcttggcg
gtgacggtcgatactcataatatcgcgtatgtaacgagtctctccatcggtgaggctatg
aagttgttcgataatcttaaactgagtgagaaggagaccacgattgcgaatatgatcttg
aaagagattaatagcagactgggtttcctggccaatgtgggtctagaatacttatcttta
agccgtgctgctggaacgttatcaggtggtgaagcacaacgtattcgtcttgcgacgcag
atcggttcaagcttaatgggtgttctttatattcttgatgaaccaagcataggtctacat
caacgtgacaatgaacgtctgattgagacactggtgcatatgcgagatatgggtaatacg
cttatcgttgtggaacatgatgaagatacgatgatggcggcggactatctcattgatatt
ggcccaggtgctgggatccatggtggacaagtgatagctgaaggaaccccacaagaaatc
atggagcatcccgactccttaacaggacagtacctcagtggacgaaaattcattccagtg
aatacgaagcgacgtaagccagaggatcgttggatcgagattaaaggtgccaaagagaac
aacctgaagaaccttaatgtgaagattcctttaggcgtgtttacggcagtaactggagtg
tcaggttctgggaagtctacactgataaacgaaatactatataagaggctagcccgcgat
ttgaacagagctgtgaaggttcgccctggtcaacataaagaaatccttggattagagcat
ttggataaagtgattgatatcgatcaatctccgattggtcgcacaccgcgatctaaccca
gctacctataccggggtcttcgatgatattcgcgatatttattctcagacgaatgaagca
aaaatccgtggttacaagaaaggccgattcagctttaacgtgaagggcggtcggtgtgag
gcttgtcgtggggatgggattcttaagattgaaatgcatttcctacccgacgtctatgtc
ccttgtgaggtatgtaagggaaatcgctataatcgtgaaaccttagaagtgaagtataag
ggtaaaagtattgcagaagtgttagcgatgacgattgaagatgcaactgagttctttgta
aatgttccgcgtattcatcgtaaactacagacgctacttgatgtaggtctaggctatgtg
cttatgggacaacctgcaacgacactctctggcggtgaagcacaacgtgtgaagttagct
tctgagctgtaccgtcgtagtacaggtaagacgatgtatattctagatgaacctactact
ggattacatgttgacgatatatctcgtttattaaccgtactccatcggctagtagattca
ggggaatcggtgctagttattgaacataatctggatgtcatcaagaccgcggactacatc
attgatcttggtccagaaggtgggagtggtggtggaacaattatagctacaggtacacca
gagcagattattaaagtagaacaatcgtatacaggtagatatttgaagccagtattagaa
cgtgatacagcacgtagtgaatcgttaagtattcctatttag
DBGET
integrated database retrieval system