KEGG   Paenibacillus crassostreae: LPB68_14395
Entry
LPB68_14395       CDS       T05196                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pcx  Paenibacillus crassostreae
Pathway
pcx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LPB68_14395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcx03400]
    LPB68_14395
DNA repair and recombination proteins [BR:pcx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LPB68_14395
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LPB68_14395
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 AAA_21 RsgA_GTPase BCA_ABC_TP_C AAA_22 AAA_25 nSTAND3 DnaJ_CXXCXGXG cobW Viral_helicase1 MMR_HSR1 ExoX-like_C
Other DBs
NCBI-ProteinID: AOZ93282
UniProt: A0A162KWG3
LinkDB
Position
3156954..3159815
AA seq 953 aa
MAIENIVIKGARVNNLKNIDITIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGHP
HCPTHGIEITSQTVEQMVDRIMQYPEKTKVQLLAPVITGRKGEHKSVFTDIGKQGFVRVR
VDGELRELSEEIELEKNKKHTIEVVVDRIVVKPDVESRLADSIEIALKISDGQLLVDVMG
EEELRFSSNFACSICGFSMDELSPRMFSFNSPFGACPDCDGLGAKMIVDQDLLIPDMSKS
IEDGAFLAWTGSTSNYYPQFLKSVCEHFNIPQNVPVSELTTEQMDKLLHGTGDQKIRFKY
ENDFGQRKEAMVVFEGIIPNLERRYRETASDGIRDFIEGFMSAKPCEGCKGKRLKKEILA
VTVDTHNIAYVTSLSIGEAMKLFDNLKLSEKETTIANMILKEINSRLGFLANVGLEYLSL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNERLIETLVHMRDMGNT
LIVVEHDEDTMMAADYLIDIGPGAGIHGGQVIAEGTPQEIMEHPDSLTGQYLSGRKFIPV
NTKRRKPEDRWIEIKGAKENNLKNLNVKIPLGVFTAVTGVSGSGKSTLINEILYKRLARD
LNRAVKVRPGQHKEILGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDIYSQTNEA
KIRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCKGNRYNRETLEVKYK
GKSIAEVLAMTIEDATEFFVNVPRIHRKLQTLLDVGLGYVLMGQPATTLSGGEAQRVKLA
SELYRRSTGKTMYILDEPTTGLHVDDISRLLTVLHRLVDSGESVLVIEHNLDVIKTADYI
IDLGPEGGSGGGTIIATGTPEQIIKVEQSYTGRYLKPVLERDTARSESLSIPI
NT seq 2862 nt   +upstreamnt  +downstreamnt
atggcaatagagaatattgttataaaaggtgcgagagtgaataatcttaagaatatagat
atcacaattccgagagaccggtttgtcgtactcacaggtctgagtggctcagggaagtct
tccttagcatttgatacgatttatgcagaaggacaacgtcggtatgtcgaatcactttct
gcatatgcgcgtcaattcctgggtcaaatggagaaacctgatgtggattctatagagggg
ctatcaccagcgatatcgattgatcagaagacaacgagtcgtaacccgcgctcaactgta
ggaacagtgacagagatctatgattatctgcgcttgctatatgcacgtgttgggcatcct
cattgtccaacacatggaatcgagattacgtcacagactgtggaacagatggtggatcga
attatgcagtatccagagaagacaaaggtgcagttacttgcacctgtgatcactggacgc
aaaggcgaacacaagagtgtatttacggatattggcaagcaaggatttgtacgcgttaga
gtagacggtgaacttcgtgaactatctgaagaaatcgagcttgagaagaataagaagcat
acgattgaagtcgtagtggatcgaattgtcgtcaagccggatgtggaatctcgcttagcc
gattcaatagagatagcattgaaaatatccgatggacagctattagtagatgttatgggt
gaggaagaactacggttcagttcgaactttgcctgttcaatttgtggctttagtatggat
gagctgtctccacggatgttctctttcaacagtccattcggagcttgtcctgattgtgat
ggattaggtgcgaagatgatcgtggatcaggatttactcattcctgatatgagtaaatct
atagaagatggcgcattcttagcttggacggggagtacatcgaattattatccgcaattt
ctgaaatcggtgtgcgaacatttcaacattccacagaatgttccagtaagtgaactaacg
acagaacaaatggataagttattgcatgggacaggagatcagaagattcgcttcaaatat
gagaatgacttcgggcaacgtaaagaagctatggtcgtgtttgaaggtatcattccgaat
ctagaacgtcgctatcgcgagacagcctccgatggtattcgtgattttatagaaggtttc
atgagcgctaagccttgcgagggctgtaaaggtaaacgtttgaagaaagaaatcttggcg
gtgacggtcgatactcataatatcgcgtatgtaacgagtctctccatcggtgaggctatg
aagttgttcgataatcttaaactgagtgagaaggagaccacgattgcgaatatgatcttg
aaagagattaatagcagactgggtttcctggccaatgtgggtctagaatacttatcttta
agccgtgctgctggaacgttatcaggtggtgaagcacaacgtattcgtcttgcgacgcag
atcggttcaagcttaatgggtgttctttatattcttgatgaaccaagcataggtctacat
caacgtgacaatgaacgtctgattgagacactggtgcatatgcgagatatgggtaatacg
cttatcgttgtggaacatgatgaagatacgatgatggcggcggactatctcattgatatt
ggcccaggtgctgggatccatggtggacaagtgatagctgaaggaaccccacaagaaatc
atggagcatcccgactccttaacaggacagtacctcagtggacgaaaattcattccagtg
aatacgaagcgacgtaagccagaggatcgttggatcgagattaaaggtgccaaagagaac
aacctgaagaaccttaatgtgaagattcctttaggcgtgtttacggcagtaactggagtg
tcaggttctgggaagtctacactgataaacgaaatactatataagaggctagcccgcgat
ttgaacagagctgtgaaggttcgccctggtcaacataaagaaatccttggattagagcat
ttggataaagtgattgatatcgatcaatctccgattggtcgcacaccgcgatctaaccca
gctacctataccggggtcttcgatgatattcgcgatatttattctcagacgaatgaagca
aaaatccgtggttacaagaaaggccgattcagctttaacgtgaagggcggtcggtgtgag
gcttgtcgtggggatgggattcttaagattgaaatgcatttcctacccgacgtctatgtc
ccttgtgaggtatgtaagggaaatcgctataatcgtgaaaccttagaagtgaagtataag
ggtaaaagtattgcagaagtgttagcgatgacgattgaagatgcaactgagttctttgta
aatgttccgcgtattcatcgtaaactacagacgctacttgatgtaggtctaggctatgtg
cttatgggacaacctgcaacgacactctctggcggtgaagcacaacgtgtgaagttagct
tctgagctgtaccgtcgtagtacaggtaagacgatgtatattctagatgaacctactact
ggattacatgttgacgatatatctcgtttattaaccgtactccatcggctagtagattca
ggggaatcggtgctagttattgaacataatctggatgtcatcaagaccgcggactacatc
attgatcttggtccagaaggtgggagtggtggtggaacaattatagctacaggtacacca
gagcagattattaaagtagaacaatcgtatacaggtagatatttgaagccagtattagaa
cgtgatacagcacgtagtgaatcgttaagtattcctatttag

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