Paenibacillus crassostreae: LPB68_14955
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Entry
LPB68_14955 CDS
T05196
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcx03016
]
LPB68_14955
Enzymes [BR:
pcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LPB68_14955
Transfer RNA biogenesis [BR:
pcx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB68_14955
Prokaryotic type
LPB68_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
AOZ93386
UniProt:
A0A167E7T5
LinkDB
All DBs
Position
3268433..3269221
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AA seq
262 aa
AA seq
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MRNLCMKVSYDGTHYNGFQTQPDGRTIQDQLEKAIKMLSDEDVKIIASGRTDAGVHAYGQ
VFNFLTQSHIPVERWPMALNTRLPDDIVVREAIEVPELFHARYSAKQKTYRYTVNANQFI
DVFQRHTQFHHHGKLNIEAMQRAIKHFIGTYDFTSFASRRSTKTSHIRTLFDAYMVVDKS
MCRSSTYDQGVIHTYVTGSGFLQHMVRIMMGTLLEVGEGKKSPDDITAIIAAEDRSKAGP
TAVSKGLILWDVEYNDFPKKTF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcaacttatgtatgaaggtcagttacgatggtacacattataacggctttcaaaca
cagcctgatggtagaacaattcaggatcaacttgagaaggctataaagatgctttctgat
gaagatgtaaagattatagcatcaggtcgtacggatgcaggtgtgcacgcctacggtcag
gtattcaatttcttgacgcaatctcacattccagtagaacggtggccgatggcacttaat
actagactaccggatgatattgttgtcagagaagcaattgaagtgccagaactctttcat
gctcgttattcagcaaagcagaaaacatatcgttatacagtaaatgctaatcaatttatt
gatgtgtttcagcgtcatactcaatttcatcatcatggaaaattaaacatcgaggctatg
caaagagctataaagcacttcatcggaacttatgatttcacatcatttgcttcaagacgt
tctacaaagacttctcatattcgaacattatttgacgcatatatggttgtggataaatcg
atgtgtagatcttctacctatgatcaaggtgttattcatacgtatgtaaccggcagtggc
tttttacagcatatggttcgtattatgatgggcactttgctagaagtgggagaaggtaaa
aagtctccagatgatataactgcgataatagcagctgaagatcggtcgaaagctggtcca
actgctgtgagcaaaggtctaattttatgggatgtagaatataatgattttccgaaaaaa
actttctaa
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