Paenibacillus crassostreae: LPB68_17930
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Entry
LPB68_17930 CDS
T05196
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03030
DNA replication
pcx03410
Base excision repair
pcx03420
Nucleotide excision repair
pcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB68_17930
03410 Base excision repair
LPB68_17930
03420 Nucleotide excision repair
LPB68_17930
03440 Homologous recombination
LPB68_17930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcx03032
]
LPB68_17930
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_17930
Enzymes [BR:
pcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB68_17930
DNA replication proteins [BR:
pcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPB68_17930
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPB68_17930
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB68_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AOZ93877
UniProt:
A0A167G0P8
LinkDB
All DBs
Position
3887308..3889968
Genome browser
AA seq
886 aa
AA seq
DB search
MDKLILIDGNSIIYRAFFAMPPLTNTKGWHTNAVYGFTNMLLRIIEDHKPTHMMVAFDAG
KITFRHESYKEYKGGRNKTPHELSEQFPLLKELLQGLGIAQYELSGYEADDIIGTISKEA
EQAGQEVLVISGDKDMFQLASEHVEIGLTRKGVTEIEIYNPEQIHERYGLKPHQITDLKG
LMGDTSDNIPGVPGVGEKTALKLLHQFGSVEDVLANIHELKGKMKEKIETHADDAVLSKK
LATIYREVVLDKTLDEMVFNGFNPDTSGPALAKLEFKSMLERLSLSGEAGLEDGIAKQPT
LNVEVTVINEDNIKEFISRLPQVKVLHVETYGENPHRAEIIGVVFSSEEHHDYVPFDLFK
TDHAAPILNWLQDPAYPKRGYDLHRMDLALHWHEIPFAGVTFDVQLAAYLLDPTESNQTI
SALAAKYGLSSLVVEEDIFGKGAKYKVPEIEVLSNHLARKSATVLSIIPKQEEELEKNEM
KSLFHDLEMPLSRILADMEKQGIEVYTKDLQELGKEFESQIHQLEEDIYRIADGKFNINS
PKQLGEILFVKLGLPVVKKTKTGFSTDAEVLEKLAPYHEIVQHILQYRTLAKLQSTYVEG
LLKEISPKTGKVHTYYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSESGWSIL
AADYSQIELRVLAHISNDERLIEAFLQDMDIHTKTAMDVFGVKPEEVDSNMRRSAKAVNF
GIVYGISDYGLSQNLNITRKEASQFIEQYFAIFQGVKQYMSDIVKEAKENGYVTTLLGRR
RYLPEINASNFNLRSFAERMAMNTPIQGTAADIIKLAMVHMDKALSDKQLKSRMLLQVHD
ELVFEVPEDELELMKVLVPEIMSKALQLVVPLNAEVSFGSNWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggataagctaattcttatagatggcaatagtattatttaccgtgctttttttgcaatg
ccgccacttacgaacactaaaggttggcatacgaatgcagtatatggatttacgaatatg
ttattgcggatcattgaggatcataagccaacacatatgatggttgcctttgatgcgggt
aaaattacattccgacatgaaagttacaaagaatataaaggtggacgtaacaaaactcca
catgaattgtctgaacagtttcctttgttaaaggagttattacagggattaggaattgca
cagtatgaattgagcggatatgaagctgatgatatcattggtaccatttcgaaagaagct
gagcaagctggtcaggaagtattagtgatatcaggggataaggatatgttccaattggct
tcggaacatgttgagattggattgactcgaaaaggtgttactgagattgaaatatacaat
ccagagcaaattcatgaaagatatgggcttaaacctcatcagattacagacttgaaagga
ctcatgggcgatacatcggataatattcctggtgtcccaggtgtgggtgagaaaactgct
cttaagcttctgcatcaatttggctcagtagaagatgttctagccaatatacatgagtta
aaggggaaaatgaaggaaaagattgagactcatgcggatgatgcggtgctaagtaagaaa
ctggcaacgatatatcgtgaagtcgtattggacaagacattggatgagatggtgttcaat
ggttttaatccagatacttcgggtccagcgttagccaaattagaatttaagtctatgctt
gagcgtctatctttatctggtgaagcaggactagaagatggtattgctaaacaacctact
ctgaatgtagaagtaacagtaattaatgaagataatataaaagaatttatttcacgtctt
ccacaagtcaaagtattacacgtggagacttatggagaaaacccacaccgcgcagaaatt
attggtgttgtgttctcatcggaagaacatcatgattatgtcccatttgatctattcaaa
acagatcatgccgcacctattctgaactggttgcaagatcctgcgtatccgaagcgcggg
tatgacttacaccggatggatctcgcactgcattggcatgagattcctttcgcaggagtt
acatttgatgttcaacttgcggcgtatttgctcgatccaaccgaatctaatcagacaata
agtgcacttgctgcaaaatatggtttatcctcattagttgttgaagaagatatatttggt
aaaggtgcgaaatataaggtgcctgagatcgaagtattgagtaaccatttagcacgtaag
tcagctacagttctcagtatcattccgaagcaagaagaagaattagagaagaatgaaatg
aagtctttattccatgatctggagatgccattatcacgtattcttgcagatatggagaag
caggggatcgaagtttatacgaaggatttgcaagaacttggtaaggagtttgagagtcag
attcaccaacttgaggaagacatatatcgtattgcagatgggaaatttaacatcaactct
ccaaaacaattaggtgagattctgttcgtgaaactaggtctgcctgttgtcaaaaagacg
aaaactggattctcaactgacgctgaggtgcttgaaaaattagccccttatcacgagatc
gtacaacatatcctgcaatatcgcacgcttgcgaaattacaatcaacatatgtcgaaggg
ttacttaaggagatttctccgaagactggaaaagtgcatacgtattatcggcagacgatt
gcagccacaggtcgattaagtagccaatttccaaatctgcagaatattccgattcgtctt
gaagaaggccgtaaaatccgtaaagtatttgttccttctgaatctggctggtccatcttg
gctgccgattattcacaaatagaattacgtgtattggcgcatatctctaatgatgaacga
ttaattgaagcatttcttcaagatatggacattcatacaaaaacagctatggatgtattc
ggagtaaaaccggaagaggtggactctaatatgcgtcgttctgctaaggcagtaaacttc
ggaattgtatacggaatcagtgattatggattatcgcagaatcttaatattactcggaaa
gaagcttcacaatttattgagcaatactttgcaatattccaaggtgttaaacaatatatg
agtgatatcgtgaaggaagcgaaagagaatggttatgtcacgacgctcttgggaagaaga
aggtatctaccagaaattaatgcaagtaattttaatcttcgatcattcgcagaacgaatg
gctatgaatacacctattcaaggtaccgcagcagatatcattaaacttgctatggtacat
atggataaggcactttcagacaaacaattaaagagtcgtatgcttcttcaagtacatgat
gaattagtttttgaggttcccgaggatgagcttgagctgatgaaagtacttgttcccgag
atcatgtctaaagcccttcaactggttgtgccgcttaatgcagaagtgagttttggtagc
aactggtatgaagctaaatag
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