Paenibacillus crassostreae: LPB68_19785
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Entry
LPB68_19785 CDS
T05196
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcx
Paenibacillus crassostreae
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcx03032
]
LPB68_19785
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_19785
Enzymes [BR:
pcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPB68_19785
DNA replication proteins [BR:
pcx03032
]
Prokaryotic type
DNA Topoisomerases
LPB68_19785
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPB68_19785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
IBR_1
Toprim_3
Rpr2
Motif
Other DBs
NCBI-ProteinID:
AOZ94211
UniProt:
A0A167FNX9
LinkDB
All DBs
Position
4269437..4271536
Genome browser
AA seq
699 aa
AA seq
DB search
MAADSLVIVESPAKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFNPKYITIRG
KGSILKELKDARKKVKHVYLAADPDREGEAIAWHLAHALDVDLTQDCRVVFNEITKQAVK
DAFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIMDRE
NEINAFVPEEYWSITAQLAKGDTTFEAKFHRLNGEKKELSSEADVQEILNEIKGASYKVS
EVKEKERQRHPSAPFTTSSLQQEAARKLNFRAAKTMSVAQQLYEGVELGKEGTVGLITYM
RTDSTRLATSAAEEIKELIGSKYGEAFVPETPRQFTKKSANAQDAHEAVRPTSILRDPES
VKAYLSRDQFRLYKLIWDRTVASQMASAILDTLSVDISAKTVTFRAVGSKVRFPGFIKVY
VEGNDDGATDDEKFLPALVPGDKLSKKDISPKQHFTQPPPRYTEARLVKTLEELGIGRPS
TYAPTLETIQRRGYIAMEEKKFMPTELGELIIEQMEQFFPEILDVEFTAHMEEDLDHVGE
GSEDWVKVLSEFYESFEKRLIVAEEEMKEIEIEDEVSDEVCEKCGKFLVYKMGRFGKFLA
CSGFPDCRTTKPIIKDIGVTCPKCKEGHVVERRSKKGRIFFGCDHYPECDFVSWDRPSIK
PCPKCNSLMIEKRNKQGNKLQCTVCDHVELVEDNDDLAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagattcgctagtcatcgtagagtcgcccgctaaggcgaagacgattgggaaa
tatttaggcagtaaatatattgtgaaagcatcaatgggtcacatcagagatttaccaaaa
agtcaaattggtgttgaggttgagaatgactttaatccaaaatatattacgattcgtgga
aaaggttcaatattgaaagaattgaaagatgctagaaaaaaagtgaaacatgtctatctc
gcagccgatccggatcgcgaaggagaagctatagcttggcatttagcgcatgcgcttgat
gttgatctgacccaagattgtcgtgtcgtatttaatgaaattacgaagcaggccgttaaa
gatgcttttaaaacaccgcgtaaaattaatatggatttagtgaatgctcaacaagcacgt
agaattcttgatcgattagttggatacaagattagtcctctattatggaagaaagtcaaa
aagggattgtctgcaggacgtgttcaatcagttgcggttaaaattattatggatcgtgag
aatgagattaatgcttttgttcctgaagaatattggagtattactgcgcaattggctaaa
ggtgacacgacctttgaagcaaagtttcaccgccttaacggtgagaagaaggaactatcc
tctgaagcagatgtacaagaaatcttgaatgagattaaaggagcttcatacaaggttagc
gaggttaaagagaaagaacgtcaacggcatccatcggcaccatttacaacgagttcattg
caacaagaagctgctagaaaactgaattttcgcgcagcgaagacgatgtcagttgcacag
caactatatgagggtgttgagttaggtaaagaaggtaccgtgggtcttattacttatatg
cgtacagattcaacaagactggctacttctgcggcggaagagattaaagaacttattggt
agcaaatatggtgaagcatttgtacctgagactccacgtcaattcactaagaaatctgct
aatgctcaagatgcccatgaagcagttcgaccgacatctattctaagagatcctgaaagt
gttaaggcatatctaagtcgcgatcaattcagattatataaactaatatgggatcgaact
gttgctagtcagatggcatcagcaatactggatacgctttctgttgatatttcggcaaaa
actgtaacttttcgagctgtgggatctaaagtgcgttttcctgggtttattaaagtttac
gttgaaggtaatgatgatggagcaacagatgatgagaaatttttacctgctcttgtacca
ggggataagttgtctaaaaaagatatatctcctaagcaacactttacgcaaccgccacca
aggtatacagaagctcgtcttgtgaagacgcttgaagagcttggaatagggcgtcccagt
acatatgcgccgacgttagagacgattcaaagacgtgggtacattgcaatggaagaaaag
aaatttatgccaactgagttaggtgagctaattatcgaacaaatggaacaattcttcccg
gaaattctagacgtggaatttacagcacatatggaagaagacttggatcatgttggtgaa
ggttctgaagattgggttaaggtactttctgaattttatgaatctttcgagaaaagactt
attgtagctgaagaagagatgaaagagattgaaatagaagatgaagtctctgatgaagtc
tgtgaaaagtgtggtaaatttctagtctataaaatgggtagatttggtaagtttcttgca
tgttcaggattccctgattgtcgcaccacgaagcctatcattaaggatattggcgttaca
tgtccaaaatgtaaggaaggccatgtcgttgaaagacgcagcaaaaaagggcggattttc
ttcgggtgtgatcattatccagaatgtgattttgtatcgtgggatcgaccttcaataaaa
ccgtgtcctaaatgtaactctctgatgattgagaaacggaataaacaggggaataagctt
caatgtacagtttgcgaccatgttgaattagtagaagacaacgacgatttagcagaatga
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