Paenibacillus crassostreae: LPB68_21930
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Entry
LPB68_21930 CDS
T05196
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx03420
Nucleotide excision repair
pcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB68_21930
03430 Mismatch repair
LPB68_21930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcx03400
]
LPB68_21930
Enzymes [BR:
pcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB68_21930
DNA repair and recombination proteins [BR:
pcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB68_21930
MMR (mismatch excision repair)
Other MMR factors
LPB68_21930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
nSTAND3
MGP3_C
AAA_11
JmjN
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOZ94923
UniProt:
A0A167EJJ9
LinkDB
All DBs
Position
pPC03:59659..61851
Genome browser
AA seq
730 aa
AA seq
DB search
MNVKEEFFNRKKNELDVSLNDVQLKAVLQTEGPLLLLASPGSGKTTTIIMRIGYLIEEKG
VDPRRIKAVTFSKASANDMKERFKRFFPNLPPVEFSTIHSFAFEVVREHFRRVRTPYQII
EGDLDLEEQSVGDSDKLLLHKKIILKKLFKSIVGENITEDKMDELTTYISFIKNKMIPSD
KWSLIPVEVPEAERILREYELFKKSGHSKLLIDFDDMLTISEQVLGGDKELLRMYQERYD
YILTDESQDTSMVQHAIIEKLVMEHGNLCVVADDDQSIYSWRGAEPSYLLNFKQVYPNAI
TLFMEQNYRSSRDVVSVANQFIKRNKNRYDKNMFTKNPPMNPIKIRSFADNVYQTKYLVQ
EIQKIENLAEVAVLYRNNSSSIALINEFDRAGIPFYMKDADNRFFSHWVVEDILNFMRMT
FTDKRSDILEKIHLKFNGYISRQQMAAVKEINNNESVFDNLLNYVQLQDYQVKQLIGSKE
TFEQMKGMPPLQAIRVIRDRLGYEKALEKICERLGFRMEYLIGILNTLEEIADTLETMEQ
FANRLKYLDSVLKNAKSSKGQNSVTFSTFHSSKGLEFERVYMLDLIEGNIPSLNDIENTA
LIEEATRLFYVGMTRAKQHLEMIVYRERDGKKVKESQFVAGVRDIMNPPKIIPKNEVAKK
EIKSAYSIPYNPNSIKSIAQLKIGEMVKHRVFGRGELLQIDGDVIEIGFSRGIKSLSIET
CLELGLLEPM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaaagaggaattctttaatcgtaagaaaaatgaattagatgtttccttaaac
gatgtccaactaaaggctgttcttcaaacggaaggaccattgctattattagcatcgcct
ggatctgggaagacgactacgatcattatgcgaattggctatctaatagaggaaaagggt
gtagacccaagaaggattaaggcagttacatttagtaaggcatcagcaaatgatatgaag
gagcgattcaaacggttctttcccaatcttccgcctgttgaattctcaacgatacatagt
tttgccttcgaagtcgtgcgggaacactttcgaagagtaagaactccttaccaaattatc
gagggtgacttggatttggaagagcaaagcgttggtgattcggacaagttgctgctacac
aaaaagattatcttgaagaagctgttcaaatcgattgtgggcgagaatattaccgaagac
aaaatggacgaactgacgacctatatcagtttcatcaaaaataagatgatcccttcagat
aaatggtcacttattccggttgaggttccagaagcagagcggattctgcgtgaatatgag
ttatttaagaagtcgggacatagtaagttgttaatagattttgacgatatgctgacgata
agtgagcaggtattagggggggataaggaattgctacggatgtaccaagagaggtacgat
tacatccttacggacgaaagccaagatacctcaatggttcaacatgccattatcgaaaag
ctggttatggaacatggaaatctttgtgttgtcgctgatgatgatcaaagtatctatagc
tggagaggtgcggaaccttcctatttgctcaacttcaaacaagtatatccgaatgccata
accttgtttatggagcagaattatcgttcatccagggatgtcgtcagtgtagctaatcag
tttattaagcgaaataaaaatcggtacgacaagaatatgttcacgaagaatcctccgatg
aatccgatcaagattaggagttttgcggataacgtataccaaactaagtatttggtgcag
gaaattcaaaagattgaaaatcttgcagaagtggcggtattgtatcgtaacaattcatcg
tcaattgcactaatcaatgagtttgatcgagcaggtattcccttttatatgaaagatgcg
gataatcgtttcttctctcattgggtggtcgaagatatcttgaactttatgcggatgacc
tttactgacaagcgttcagacattttagaaaaaatccatttgaagtttaacggctacatt
agcagacagcagatggcggcagtgaaagaaatcaacaacaatgaatcggtatttgataat
ttgctgaattacgtccagttgcaggattatcaagtgaaacaattgatcggaagcaaagaa
acattcgaacaaatgaaagggatgccaccactacaggctatccgtgtcattcgagatcga
ttaggttatgagaaggctcttgaaaagatatgtgaacgtcttggattccgaatggaatac
ttgataggaatcctaaacacattagaagagattgcagatactctggagacaatggagcaa
tttgcgaatcggctaaagtatcttgattcggttttaaagaatgcaaagtccagcaagggt
caaaattcagtaacgttctcaacgtttcatagctcgaagggattagaatttgagagagta
tatatgcttgatttgattgaaggaaatattccatctttaaatgacatcgaaaataccgcc
ttaatagaagaagcgacacggttgttctatgttggcatgacaagggcgaaacagcacttg
gagatgatcgtatatagggaaagagatgggaagaaggttaaagaatcacaatttgtagca
ggtgttagggatattatgaatcctccaaagataatccctaagaatgaggtagcaaaaaag
gagataaaatcagcctattcgatcccgtacaatcccaattcaataaaaagtatagctcaa
ctgaagattggggaaatggtaaaacatagggtatttggtagaggtgaacttcttcaaatc
gatggagatgtcatcgaaataggttttagtagaggaataaaaagtctatctattgaaacg
tgtctggaattgggactgctggagccaatgtaa
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