Plasmodium cynomolgi: PCYB_022120
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Entry
PCYB_022120 CDS
T02490
Name
(RefSeq) DNA mismatch repair protein PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03430
Mismatch repair
pcy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PCYB_022120
03460 Fanconi anemia pathway
PCYB_022120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_022120
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PCYB_022120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
His_Me_b4a2
Motif
Other DBs
NCBI-GeneID:
14690970
NCBI-ProteinID:
XP_004220609
UniProt:
K6V6B9
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Position
2:488969..492809
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AA seq
1223 aa
AA seq
DB search
MKIQNIGEESIHNICSSQVIFTLSSVVKELVENSIDADATEIKIKLVENGIKLIQVNDNG
AGIKKSNFENVCARHATSKITEFEDIHTSLNTLGFRGEALNSLCMLSDLSIVTKHDESSH
GYLLTFDSLGRLSHEEPIARLRGTTVSCENIFKNIPIRKKDFIKNIKLQLSDLLLLMQQY
AIIYCHVKFAIHNVVTVKGNVKNLNMLLTNGGKETVKKSVHTIYGKKNIGNLIDFNIDSE
EWKLRAYISDNNSGRRDRDIQFYYINSRPIHVLKNVNKIINSIYREFNSRLYPIIICNIL
SDTKNFDINVTPDKREVFFIYENELCEKIKISLVKLLTPKTSQLVDTHIGDYFLKANNIQ
LPMLGGSSSHGKAMLDPPKEEGTIAEGGALSQLLPSEASLGGYSPSEPIRIGQNGDKTAH
SWEGARGTTGGVKEELPMSQRGLPNGSDGGGHVEGGGHVERGDHVERGDHVDRDGQASQT
AHQHANVWPRQTSDDDEPGGRGSFTKSSQPQVSVRVKEEHPQEERTPPFDSSEQFFGSPV
VNGGSNSPEQVDLPSSYHRAGRARQGWQVEGFVSKKEAQGDPQEEEAPRVEAYEYKLEGV
PTEEVCELEDHPNAHVYEYQLGDGSTAEGCELEDHPSVHAFEYKLGDSPQVRVQEYQLED
PPQVRVQEYRLEDSPKVRVQEYQLEDPPQVRVLEYQLEDKGDRDSTHYDIIRRDGDDSGE
GERQPQKRHPEGGSHNRIGDSPGSPDSPGSPDSPDLPNSPDSPDPPDYTFEDLKENIKRS
CIKNIPIDINMYINREQMKSGFDYDQIHVVSLTNSEKIKNIIFPKGKEQEKAKSYLCLTD
EKQVSEYADLFNSSLSIKEAVEKGSQVRNVSGEGSSGEDISFSNIDEQKKDLYFKSNLFE
KLKICGQFNKGFVISKIDLLYFQRGRREKVVNPVGSGGKEEEEIEPQGNSSYALFIIDQH
AADEKSNFEKYNKIFTMKSQKLISKIDLELSPAQIYIIEKNLEIFLHNGFDVEIVEEPVQ
KRRRVKAADSTDATDAADAGEGALMQVKVYLLSLPVFNGRILEVEDFMSLLHHLTEHPIT
YDKASFQMFIRNKGQPNKTTDTWFNYNFPRPQKVWRILASKACRNAIMVGKTLNVAEMIK
IKKKLSVLKNPWNCPHGRPTIKYIINDMDIKSCFENYYVKLYDEITNLIVTKNYDAYKYL
FHNHAFFLIMSTKPMLGPLLKFQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccagaatatcggggaggagtctatccataacatatgcagcagccaagtgata
ttcacgctaagcagtgtagtaaaggagctagtggaaaatagcatagatgcagatgcaaca
gaaataaagataaagctagtcgaaaatggtatcaaattaatacaagttaatgacaatgga
gcaggaattaaaaagtccaatttcgaaaatgtttgcgccagacatgccacatcaaagatt
actgaatttgaagatatacacacctccttaaatacattagggttcagaggggaagcatta
aattccttgtgtatgttaagcgacttaagcattgtaacaaagcatgatgaaagtagccat
gggtatttgctaacatttgatagccttgggagattaagtcatgaagaaccaatcgcacga
ctgagaggaacaacagtaagttgtgaaaatatttttaaaaatatccccatacggaaaaaa
gactttataaaaaatataaaattacagctctccgatttgcttctccttatgcaacaatat
gcaattatttattgtcacgtaaaatttgcgattcacaatgtcgtcacggtgaaggggaac
gtgaaaaatctgaacatgttattaaccaacggagggaaagaaactgttaaaaaaagtgtt
catactatatatgggaaaaaaaatatcggcaatctgatcgattttaatatagactcagaa
gagtggaagctcagggcatatataagtgataacaacagtggcaggagagatagagacatc
caattttattacattaacagtagacctatacatgtactaaaaaatgtgaataaaattatc
aactccatttacagagagtttaatagtaggttgtaccccatcattatttgcaacatcctg
tccgataccaaaaattttgatatcaatgttactccagataagagagaggttttttttatt
tacgaaaatgagttgtgtgagaagatcaagatctccttggttaagttgctcactccgaag
actagccaactcgtcgatacgcacatcggtgattattttttgaaggccaacaatatacag
ctccccatgttggggggttcttcttcacatgggaaggcaatgcttgacccacctaaagaa
gaaggtaccattgcagaggggggagcgctgtcacagttgctgcccagcgaggcatcactc
gggggatactccccaagcgaaccaattcgaattggccaaaacggggacaagacagcacat
tcctgggagggggcaagaggcactactgggggagtcaaggaggagctgcccatgtcgcag
cggggcctcccaaatggaagcgacggaggtggtcacgttgaaggaggtggtcacgttgaa
agaggcgaccacgttgaaagaggcgatcatgtggatagagatggccaagctagccaaact
gcccatcaacatgcgaatgtgtggccacggcaaacatctgatgatgacgaaccgggtggg
agaggcagcttcacgaaaagttcgcagccccaggtgagtgtgcgagtgaaggaggagcac
cctcaggaagagcgcacacctccgtttgactcgagtgagcaattttttggcagtcctgtc
gttaatggggggagtaactctcccgagcaggtggacctcccgagcagttatcatcgcgcg
gggcgcgcacggcagggctggcaagtcgaagggttcgtttcgaaaaaagaagctcagggg
gaccctcaagaggaggaggcccccagggtggaagcgtacgagtacaagttggagggcgtt
ccgactgaggaggtatgcgagctggaggatcaccccaatgctcatgtgtacgagtaccag
ctgggggatggttcgacggcggaggggtgcgagctggaagatcaccccagtgtacatgcg
ttcgagtataagttgggggattcgcctcaggtgcgcgttcaagagtaccagctggaggat
ccgccgcaagtgcgcgttcaagagtaccggctggaggactcacctaaggtgcgcgttcaa
gagtaccagctggaggatccgccgcaagtgcgcgttctagagtaccagctggaggacaag
ggagatagagatagcacccactacgacataatccgcagagatggtgacgactctggtgag
ggagaacggcagccgcaaaaaagacatcctgaaggagggagccacaaccggattggagat
tcacccggctcacccgactcacccggctcacccgactcacccgacctacccaactcaccc
gactcaccggacccccccgactacaccttcgaagacttaaaagaaaacataaaaaggagc
tgcatcaaaaatatccccatagacatcaacatgtatattaatagggaacaaatgaagagc
gggttcgattatgatcagatccatgttgttagtttaacaaatagcgaaaaaatcaaaaac
ataatttttccaaaagggaaggaacaagagaaggcgaagagctacctgtgcctaacggat
gagaagcaggtcagtgagtacgcggatttgtttaatagcagcttgagcattaaggaggca
gtcgagaagggaagtcaggtgagaaacgtctccggagaaggaagctctggtgaagacata
agcttcagcaatattgatgaacagaaaaaggatttatattttaagtccaacctttttgaa
aaactaaaaatttgtggtcaattcaacaaagggtttgtcatttcgaaaattgatttgctg
tactttcaaaggggtcgtagagaaaaagtggtaaatccagtagggtctggggggaaggag
gaggaggaaatcgaaccgcaagggaacagcagctatgccctgttcattatagaccaacat
gctgcagacgagaaatccaatttcgaaaagtacaacaaaatattcaccatgaagtcgcag
aaattgattagcaaaattgacttggaattgagtcctgcgcagatttatatcatcgagaaa
aatttggagatatttttgcataatggctttgacgtggagattgtggaggagcccgttcag
aagaggagaagggtgaaagcggcggactcgaccgatgcgaccgacgcggccgatgcgggg
gaaggcgccctgatgcaagtgaaggtctacttgctgtccctccccgtgttcaacgggagg
atcctggaggtcgaagacttcatgtccctgctgcaccacttgacagagcacccgataacg
tacgacaaggccagctttcagatgttcatacggaacaagggccaacccaataagacgacg
gacacctggtttaactacaacttcccgcgcccccagaaggtctggcggatcctggcctcc
aaggcctgcagaaacgccatcatggtagggaaaaccctgaacgtggccgaaatgatcaaa
attaaaaaaaaacttagcgtgttgaagaacccgtggaactgcccccacggcaggcccacc
atcaagtacatcataaacgacatggacataaaaagttgcttcgaaaattactacgtaaag
ctgtacgacgaaattacaaatctgattgtaacaaagaattacgatgcgtacaagtacctc
ttccacaaccacgccttctttttgattatgtctaccaagccgatgctcggcccgctcctg
aagtttcagtga
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