Plasmodium cynomolgi: PCYB_031680
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Entry
PCYB_031680 CDS
T02490
Name
(RefSeq) pre-mrna splicing factor
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCYB_031680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcy03041
]
PCYB_031680
Spliceosome [BR:
pcy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PCYB_031680
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
14691276
NCBI-ProteinID:
XP_004220886
UniProt:
K6US44
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Position
3:complement(338544..340764)
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AA seq
558 aa
AA seq
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MVSPPTLRQLCATLADTFLQDLEDLEFEEENNFVNFSAEKKEGEKGEGGKGSHVEEAKFQ
EGDYEEIVDAIEEFLNEKIKKKERKISELLYDEDFLKMMNSIRDYVMEESGEGGEVGEDG
PDGPDGEGGEGGEGGKSRRAKKRRRKGQSPGEEDADADELEDANEDAATSNNADEVLIDK
CIELIIQIDTEILNIHKYVRDIYSTKFPELDSIVYTPLEYISVVSKIKNETDLKNIDFSD
ILPNTTVMAITVASSMTTGINLSDYSLKNCLSFCNEALELNENRRMILLYLESKMFLLAP
NLTMLLGSALTARLISSVGSLKNLSITSSQNLIVVGSSKKSVLGLSNVRKTFGIGILSTS
EIVQSVPDAFKKKAISLLAGKCSLASRVDYFKKYPEGQYGLLLRENLISHLIKLQEPPPM
KQKKILPMPDEKRKRKRGGKRYRKLKEKTEITELRKQINRLPFGPNSNEDFYTFTDQNAV
LLNSNITKLKYQSKQKVNNVAKKKNLSVHSSGATGGLSSSLIFTPLQGIELFNPSVVNPR
PDPVENKYFSSKAQFRKV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtcctccaacgttgcggcagctctgtgcaaccctagcggacacgttcctgcag
gatctcgaagacttggagtttgaggaggagaataactttgttaactttagtgcagaaaag
aaagaaggtgaaaaaggcgaaggggggaagggcagccatgtggaggaggccaagttccag
gagggtgactacgaagagattgttgatgcgattgaagagttcctaaacgaaaagataaaa
aaaaaggaaaggaaaatatctgaattgctgtatgatgaggacttcctcaaaatgatgaac
agcatcagggactatgtcatggaggagagcggcgaagggggggaagtcggggaggatggc
ccggatggcccggatggagaaggtggagaaggtggagaaggtggaaaatcccgtcgagct
aaaaagcgaaggagaaaagggcagtcacctggagaagaagacgccgatgcggatgagcta
gaagatgcgaatgaagacgccgccacttccaacaacgccgacgaagtgctgatcgacaag
tgcatcgagctgataatccaaatagacacagaaatcctaaacatccacaagtacgtgaga
gatatctactcgacgaaattcccagagttagactctatcgtgtatacccccctggagtac
ataagcgtggtgagcaaaataaaaaacgaaacagatttgaaaaatattgatttctctgac
attctaccgaataccactgtaatggctatcacagtcgcatcaagtatgaccacagggata
aacctatcagattactccctaaagaattgcctatccttctgtaatgaagcattagaatta
aacgaaaatagacgaatgattttgctatacttagagagcaaaatgtttcttctcgccccc
aatttgacaatgctgctaggtagtgcattaacagctcgtttaattagctcagtggggtcg
ttaaaaaatctgtccattacatcatctcagaatcttatagtggtaggtagttcgaagaag
tcggtccttggacttagcaatgtgcgcaagacattcgggataggtattttaagtacctcc
gaaattgtacagagtgtccctgatgcatttaaaaaaaaagccatcagtttgctagctggg
aagtgtagtctagcatctagagtcgattactttaaaaaatatcctgagggacaatatggg
ttactactacgagaaaatttaataagtcatctaataaaattacaagaaccgcctccaatg
aaacagaaaaaaatcctccccatgcctgatgagaagaggaaacgaaaaagaggaggaaag
agatatagaaagttaaaagaaaaaacggagattactgaattgaggaagcaaattaatagg
ttgccctttggacccaactcgaatgaagacttttacaccttcaccgatcaaaatgcagtt
ttgctaaactcaaatatcaccaagttgaagtaccagtctaagcagaaggtgaataatgtg
gccaagaaaaagaacctctccgtgcactccagtggagcaactgggggattgtcgtcctcc
ctgattttcacccccctgcagggcatcgagctgttcaacccctccgtcgtcaacccgagg
ccggaccccgtcgagaacaagtacttctcgagcaaggcccagttccgcaaggtgtag
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