Plasmodium cynomolgi: PCYB_031730
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Entry
PCYB_031730 CDS
T02490
Name
(RefSeq) replication factor a protein
KO
K07466
replication factor A1
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03030
DNA replication
pcy03420
Nucleotide excision repair
pcy03430
Mismatch repair
pcy03440
Homologous recombination
pcy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCYB_031730
03420 Nucleotide excision repair
PCYB_031730
03430 Mismatch repair
PCYB_031730
03440 Homologous recombination
PCYB_031730
03460 Fanconi anemia pathway
PCYB_031730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcy03000
]
PCYB_031730
03032 DNA replication proteins [BR:
pcy03032
]
PCYB_031730
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_031730
Transcription factors [BR:
pcy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PCYB_031730
DNA replication proteins [BR:
pcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PCYB_031730
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PCYB_031730
MMR (mismatch excision repair)
PCYB_031730
DSBR (double strand breaks repair)
HR (homologous recombination)
PCYB_031730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
OB_MEIOB_N
DUF223
Motif
Other DBs
NCBI-GeneID:
14691281
NCBI-ProteinID:
XP_004220891
UniProt:
K6US48
LinkDB
All DBs
Position
3:complement(<353621..>357235)
Genome browser
AA seq
1187 aa
AA seq
DB search
MNRNEEILSKATPDFIYKFFTEPSSEESIGANQIFLKVIDGTIPPQYYAIVHVGTEEASM
TTAPISYVKKLIAIEKFSITNYYGKLFILTKKLRVLMSVDYFDIEDLFRRYQLQSISYLL
LNTKAENASKDGGSRPVSEYNGEGRARTSNMISRYSSEHGNESKTRESNYYPRGGSAGAG
AGAGAGAGAGAEYSNTAIPPASYSKLSDRQEGDTRADSYDRYQRVSGENLIKEPVPKNSS
AAYEERPPYGDKPSYGERQPYGDKPPYGEKQPYGDNPPYGEKQPYGDKPPYGERPPYRDA
PQNYHHGRMAEDKGRGKQFPERLNDPPSTAKFAHGESSTGRDYLPYGANELERNPREATS
LSHQKDPTSQRAGQPYSNRNNTAGYDPNSANGANSGNGANSANSANSAYGKNHYSSGKSR
THNIAGELNNGRSGSSYDPGVGPPMGSSVYREEPPLGESISRSHPKARTSNTNAYMYEGE
MEEGPAGLGAAGLGAAGPRAATAGEYKGRYTPTGNNPERGPPEERSYYQSGRGNSNMSKN
ASGAHDYYSYPPPRDAEEGGNCRSVDDETYYGRMGAPHGNGSGGGNSNEVGTKMDEGGRN
GRNYNGEVAKLSRSEEAIHERYVPSEGATSGGGYGHRGGSNYGPSGVGSGGNDNNGSGHR
GGMEPSKKARSESMGSLQETKETLNDMEEYPTERRSDTKSMLKENTSSRNSRKCAPYQQT
NNPVIKINDGILMQINKLSQYSSKWIIKARVQSKDNVRRFYSGNKEGKVFNIELCDEDGE
IKANFFGKAVDKWYDYLQVGKIYKISKGNVKAANKKFNTLKHDCEITLDENSIIELLEEN
DNIPKFIYNFASIDTIKNMNTGSLVDVIGVVFSFQETMQILIKKTGQYKEKRDLILIDDS
NETINVTLWGEHALKIEEVHLRDNSIICFKYLKVGEWQGKKLESHPKTKIDVNPEIERTH
VLQTWWSSNKQNLYSSVNVNTNSFHIELQKTIEEIKKDVNLANEDALSGKGIVFTTFGFI
DHIYNSIPVYSACPDCNKKMITNVVEEEEDDINSSQMMDQSMYCAKCNKNNTPIYNYSIN
LKITDSTDSLRASAFAGCARTIMNGLSADEFMALRQEYVTQENIENFDLIEKVKLNEFFF
RIKAYMTSHMDELKKNYTIIEIIPLNKLLVDNCKYLIRSIRSLTEKR
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaacgaagaaattctgtccaaggcaacgcctgactttatatacaaatttttt
acagaacccagctcagaagaaagcataggggcaaatcaaatttttttaaaagtgatagat
ggcaccatcccaccacagtactatgccattgtacacgtggggacggaagaagcaagtatg
accactgcacctatatcttatgtaaaaaaattaatagctatagaaaaattttccatcaca
aattactatggaaagctttttatattaacaaaaaaacttcgggtccttatgagtgtagat
tatttcgatattgaggacctgtttaggagataccagcttcagagtatatcctacttgttg
ctgaacacaaaagctgaaaacgcttctaaggatgggggatctagacctgtcagcgaatac
aatggagaagggagagccagaactagcaacatgatttcccgctattcaagtgagcatgga
aatgagagcaaaacgagggagagtaattattacccccgtggagggagcgcaggggcgggg
gcaggagcaggggcaggagcaggagcaggggcagaatacagtaatactgccattccgcca
gctagctattccaaattgagtgatcgccaggaaggggacaccagagctgacagctatgac
aggtatcaacgagtgtcgggagaaaatttgatcaaggagccggtgcccaagaatagcagt
gctgcatatgaggagaggcctccctacggggataaaccctcttacggggagaggcaaccc
tacggggataaacctccttacggagagaagcaaccctacggggataaccccccttacgga
gagaagcaaccctacggggataaacccccttatggggagaggccgccgtatagggacgcc
ccgcaaaactaccaccacggcagaatggcagaagataagggaagggggaagcaattcccc
gaaaggttgaatgacccccccagcacggccaagttcgcgcatggcgagagttccaccggt
cgcgactatctcccgtacggtgcaaacgaattggaaaggaacccccgcgaggccacatct
ctctcgcaccaaaaggaccccacttcgcagagggcgggccagccctacagcaatcgaaac
aacaccgctgggtatgaccccaacagcgcaaatggtgcaaatagtggaaatggtgcaaat
agcgcaaatagcgcaaatagcgcttatggaaagaaccactacagcagcggtaagagcagg
acgcataacatcgcaggagagctgaacaacggcagaagcggcagcagttacgatcccgga
gtcggcccccccatgggctcaagcgtgtacagagaagaaccccctttgggggaaagcatt
agtagaagtcaccccaaggcgcgcacgagcaacacgaacgcctatatgtacgagggggaa
atggaggagggaccagctgggttgggagcagctggattgggggcagctgggccgagggca
gccaccgccggggagtacaagggccggtatacccccactgggaataacccagagaggggc
ccccccgaagagaggagctattatcaaagtggcagggggaacagcaacatgagcaagaac
gcaagcggggcgcatgactactatagctaccccccaccacgtgatgcagaagaggggggt
aactgcagaagtgtggacgatgagacgtattacggaaggatgggagctccacacgggaat
ggaagcggaggaggaaactcgaatgaggtgggtacgaaaatggatgaagggggaagaaat
ggtaggaattacaatggagaggtggcgaagcttagtaggagcgaagaggcgatacatgag
aggtatgttccttctgagggggcaaccagtggaggaggttacggtcataggggggggagc
aattacggcccatccggtgtaggaagcggaggcaatgataataacggaagtggtcaccgg
ggagggatggaaccgagcaagaaggcaaggagcgaaagcatgggaagtctgcaagaaacg
aaggaaacactaaacgatatggaggagtaccccacggagaggaggagcgacacaaagagc
atgctgaaagaaaatacctccagtaggaatagcaggaaatgcgccccctaccaacaaacc
aacaatccagtaataaaaataaatgatggcattttaatgcaaataaataagctgtcccag
tattcatccaaatggataatcaaggcaagggttcagtctaaggataatgtgagaaggttc
tactcaggaaacaaagaagggaaggtattcaacatcgaattgtgtgatgaagatggagaa
ataaaagcaaacttttttggaaaagcagtggacaaatggtatgactatctccaagtagga
aaaatatataaaataagtaaaggaaatgtcaaggcagctaacaaaaaatttaatacatta
aaacatgactgtgaaattacgctagacgaaaattcaattatcgaactgttggaagaaaat
gataatatccccaaatttatttacaattttgcatctatagatactataaaaaatatgaat
acaggttcgctagtagatgtgataggagtagtattcagcttccaagaaacgatgcaaata
ttgataaaaaaaacaggacaatataaagagaaaagggatctaattctgatagatgatagc
aacgaaacgattaatgtaactctgtggggagaacatgctttgaaaattgaagaagtgcat
ctaagagataacagcataatctgctttaagtatttaaaagttggtgagtggcagggaaaa
aaactggagtcccacccaaagacaaagattgacgtgaatccagaaattgagagaacccat
gtgctacagacttggtggagtagtaacaaacagaacctttacagctcggtgaatgtgaat
acgaatagcttccatatcgagttacaaaaaactattgaagaaattaaaaaggatgttaat
ttggctaatgaagatgccttatcaggaaaaggaatcgtttttacgacttttggtttcatc
gatcatatttataactccatccctgtgtactcggcttgtccggattgcaataaaaaaatg
attacaaatgtcgtggaggaggaagaggacgatattaattcctcccaaatgatggaccaa
tctatgtactgtgccaaatgcaacaaaaataacacccccatatataactactccattaat
cttaaaattacagacagcacggattccttgagggcctctgcctttgctggatgtgctcgt
actatcatgaacggcttgtccgctgacgagttcatggccctcaggcaggagtacgtcacg
caggaaaatattgagaacttcgacctcattgagaaggtcaagctgaatgagttttttttt
cgcatcaaggcttacatgacgtcacacatggatgagctgaagaagaactacaccattata
gagatcatcccacttaacaagctgctcgtggacaactgcaagtatttgatccggtccatc
cgcagcctgacggagaagcggtga
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