KEGG   Plasmodium cynomolgi: PCYB_031730
Entry
PCYB_031730       CDS       T02490                                 
Name
(RefSeq) replication factor a protein
  KO
K07466  replication factor A1
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03030  DNA replication
pcy03420  Nucleotide excision repair
pcy03430  Mismatch repair
pcy03440  Homologous recombination
pcy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCYB_031730
   03420 Nucleotide excision repair
    PCYB_031730
   03430 Mismatch repair
    PCYB_031730
   03440 Homologous recombination
    PCYB_031730
   03460 Fanconi anemia pathway
    PCYB_031730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcy03000]
    PCYB_031730
   03032 DNA replication proteins [BR:pcy03032]
    PCYB_031730
   03400 DNA repair and recombination proteins [BR:pcy03400]
    PCYB_031730
Transcription factors [BR:pcy03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    PCYB_031730
DNA replication proteins [BR:pcy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    PCYB_031730
DNA repair and recombination proteins [BR:pcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     PCYB_031730
   MMR (mismatch excision repair)
     PCYB_031730
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     PCYB_031730
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon CDC24_OB3 OB_MEIOB_N DUF223
Other DBs
NCBI-GeneID: 14691281
NCBI-ProteinID: XP_004220891
UniProt: K6US48
LinkDB
Position
3:complement(<353621..>357235)
AA seq 1187 aa
MNRNEEILSKATPDFIYKFFTEPSSEESIGANQIFLKVIDGTIPPQYYAIVHVGTEEASM
TTAPISYVKKLIAIEKFSITNYYGKLFILTKKLRVLMSVDYFDIEDLFRRYQLQSISYLL
LNTKAENASKDGGSRPVSEYNGEGRARTSNMISRYSSEHGNESKTRESNYYPRGGSAGAG
AGAGAGAGAGAEYSNTAIPPASYSKLSDRQEGDTRADSYDRYQRVSGENLIKEPVPKNSS
AAYEERPPYGDKPSYGERQPYGDKPPYGEKQPYGDNPPYGEKQPYGDKPPYGERPPYRDA
PQNYHHGRMAEDKGRGKQFPERLNDPPSTAKFAHGESSTGRDYLPYGANELERNPREATS
LSHQKDPTSQRAGQPYSNRNNTAGYDPNSANGANSGNGANSANSANSAYGKNHYSSGKSR
THNIAGELNNGRSGSSYDPGVGPPMGSSVYREEPPLGESISRSHPKARTSNTNAYMYEGE
MEEGPAGLGAAGLGAAGPRAATAGEYKGRYTPTGNNPERGPPEERSYYQSGRGNSNMSKN
ASGAHDYYSYPPPRDAEEGGNCRSVDDETYYGRMGAPHGNGSGGGNSNEVGTKMDEGGRN
GRNYNGEVAKLSRSEEAIHERYVPSEGATSGGGYGHRGGSNYGPSGVGSGGNDNNGSGHR
GGMEPSKKARSESMGSLQETKETLNDMEEYPTERRSDTKSMLKENTSSRNSRKCAPYQQT
NNPVIKINDGILMQINKLSQYSSKWIIKARVQSKDNVRRFYSGNKEGKVFNIELCDEDGE
IKANFFGKAVDKWYDYLQVGKIYKISKGNVKAANKKFNTLKHDCEITLDENSIIELLEEN
DNIPKFIYNFASIDTIKNMNTGSLVDVIGVVFSFQETMQILIKKTGQYKEKRDLILIDDS
NETINVTLWGEHALKIEEVHLRDNSIICFKYLKVGEWQGKKLESHPKTKIDVNPEIERTH
VLQTWWSSNKQNLYSSVNVNTNSFHIELQKTIEEIKKDVNLANEDALSGKGIVFTTFGFI
DHIYNSIPVYSACPDCNKKMITNVVEEEEDDINSSQMMDQSMYCAKCNKNNTPIYNYSIN
LKITDSTDSLRASAFAGCARTIMNGLSADEFMALRQEYVTQENIENFDLIEKVKLNEFFF
RIKAYMTSHMDELKKNYTIIEIIPLNKLLVDNCKYLIRSIRSLTEKR
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgaacaggaacgaagaaattctgtccaaggcaacgcctgactttatatacaaatttttt
acagaacccagctcagaagaaagcataggggcaaatcaaatttttttaaaagtgatagat
ggcaccatcccaccacagtactatgccattgtacacgtggggacggaagaagcaagtatg
accactgcacctatatcttatgtaaaaaaattaatagctatagaaaaattttccatcaca
aattactatggaaagctttttatattaacaaaaaaacttcgggtccttatgagtgtagat
tatttcgatattgaggacctgtttaggagataccagcttcagagtatatcctacttgttg
ctgaacacaaaagctgaaaacgcttctaaggatgggggatctagacctgtcagcgaatac
aatggagaagggagagccagaactagcaacatgatttcccgctattcaagtgagcatgga
aatgagagcaaaacgagggagagtaattattacccccgtggagggagcgcaggggcgggg
gcaggagcaggggcaggagcaggagcaggggcagaatacagtaatactgccattccgcca
gctagctattccaaattgagtgatcgccaggaaggggacaccagagctgacagctatgac
aggtatcaacgagtgtcgggagaaaatttgatcaaggagccggtgcccaagaatagcagt
gctgcatatgaggagaggcctccctacggggataaaccctcttacggggagaggcaaccc
tacggggataaacctccttacggagagaagcaaccctacggggataaccccccttacgga
gagaagcaaccctacggggataaacccccttatggggagaggccgccgtatagggacgcc
ccgcaaaactaccaccacggcagaatggcagaagataagggaagggggaagcaattcccc
gaaaggttgaatgacccccccagcacggccaagttcgcgcatggcgagagttccaccggt
cgcgactatctcccgtacggtgcaaacgaattggaaaggaacccccgcgaggccacatct
ctctcgcaccaaaaggaccccacttcgcagagggcgggccagccctacagcaatcgaaac
aacaccgctgggtatgaccccaacagcgcaaatggtgcaaatagtggaaatggtgcaaat
agcgcaaatagcgcaaatagcgcttatggaaagaaccactacagcagcggtaagagcagg
acgcataacatcgcaggagagctgaacaacggcagaagcggcagcagttacgatcccgga
gtcggcccccccatgggctcaagcgtgtacagagaagaaccccctttgggggaaagcatt
agtagaagtcaccccaaggcgcgcacgagcaacacgaacgcctatatgtacgagggggaa
atggaggagggaccagctgggttgggagcagctggattgggggcagctgggccgagggca
gccaccgccggggagtacaagggccggtatacccccactgggaataacccagagaggggc
ccccccgaagagaggagctattatcaaagtggcagggggaacagcaacatgagcaagaac
gcaagcggggcgcatgactactatagctaccccccaccacgtgatgcagaagaggggggt
aactgcagaagtgtggacgatgagacgtattacggaaggatgggagctccacacgggaat
ggaagcggaggaggaaactcgaatgaggtgggtacgaaaatggatgaagggggaagaaat
ggtaggaattacaatggagaggtggcgaagcttagtaggagcgaagaggcgatacatgag
aggtatgttccttctgagggggcaaccagtggaggaggttacggtcataggggggggagc
aattacggcccatccggtgtaggaagcggaggcaatgataataacggaagtggtcaccgg
ggagggatggaaccgagcaagaaggcaaggagcgaaagcatgggaagtctgcaagaaacg
aaggaaacactaaacgatatggaggagtaccccacggagaggaggagcgacacaaagagc
atgctgaaagaaaatacctccagtaggaatagcaggaaatgcgccccctaccaacaaacc
aacaatccagtaataaaaataaatgatggcattttaatgcaaataaataagctgtcccag
tattcatccaaatggataatcaaggcaagggttcagtctaaggataatgtgagaaggttc
tactcaggaaacaaagaagggaaggtattcaacatcgaattgtgtgatgaagatggagaa
ataaaagcaaacttttttggaaaagcagtggacaaatggtatgactatctccaagtagga
aaaatatataaaataagtaaaggaaatgtcaaggcagctaacaaaaaatttaatacatta
aaacatgactgtgaaattacgctagacgaaaattcaattatcgaactgttggaagaaaat
gataatatccccaaatttatttacaattttgcatctatagatactataaaaaatatgaat
acaggttcgctagtagatgtgataggagtagtattcagcttccaagaaacgatgcaaata
ttgataaaaaaaacaggacaatataaagagaaaagggatctaattctgatagatgatagc
aacgaaacgattaatgtaactctgtggggagaacatgctttgaaaattgaagaagtgcat
ctaagagataacagcataatctgctttaagtatttaaaagttggtgagtggcagggaaaa
aaactggagtcccacccaaagacaaagattgacgtgaatccagaaattgagagaacccat
gtgctacagacttggtggagtagtaacaaacagaacctttacagctcggtgaatgtgaat
acgaatagcttccatatcgagttacaaaaaactattgaagaaattaaaaaggatgttaat
ttggctaatgaagatgccttatcaggaaaaggaatcgtttttacgacttttggtttcatc
gatcatatttataactccatccctgtgtactcggcttgtccggattgcaataaaaaaatg
attacaaatgtcgtggaggaggaagaggacgatattaattcctcccaaatgatggaccaa
tctatgtactgtgccaaatgcaacaaaaataacacccccatatataactactccattaat
cttaaaattacagacagcacggattccttgagggcctctgcctttgctggatgtgctcgt
actatcatgaacggcttgtccgctgacgagttcatggccctcaggcaggagtacgtcacg
caggaaaatattgagaacttcgacctcattgagaaggtcaagctgaatgagttttttttt
cgcatcaaggcttacatgacgtcacacatggatgagctgaagaagaactacaccattata
gagatcatcccacttaacaagctgctcgtggacaactgcaagtatttgatccggtccatc
cgcagcctgacggagaagcggtga

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