Plasmodium cynomolgi: PCYB_041230
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Entry
PCYB_041230 CDS
T02490
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03030
DNA replication
pcy03410
Base excision repair
pcy03420
Nucleotide excision repair
pcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCYB_041230
03410 Base excision repair
PCYB_041230
03420 Nucleotide excision repair
PCYB_041230
03430 Mismatch repair
PCYB_041230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcy03032
]
PCYB_041230
03036 Chromosome and associated proteins [BR:
pcy03036
]
PCYB_041230
03400 DNA repair and recombination proteins [BR:
pcy03400
]
PCYB_041230
DNA replication proteins [BR:
pcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PCYB_041230
DNA Replication Termination Factors
ELG1-RFC complex
PCYB_041230
Chromosome and associated proteins [BR:
pcy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PCYB_041230
DNA repair and recombination proteins [BR:
pcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PCYB_041230
Check point factors
HRAD17(Rad24)-RFC complex
PCYB_041230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_30
AAA_22
RuvB_N
AAA_19
SLFN-g3_helicase
AAA_14
AAA_16
nSTAND3
AAA_11
DEAD
AAA_23
DUF2247
AAA_28
KTI12
RNA_helicase
FtsK_SpoIIIE
AAA_5
PIF1
bpMoxR
AAA_18
AAA_7
AAA_assoc_2
Viral_helicase1
AAA_2
HTH_44
ResIII
MeaB
AAA_24
DUF815
Mg_chelatase
SNF2-rel_dom
RsgA_GTPase
ABC_tran
DUF1949
VapE-like_dom
AAA_33
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
14695759
NCBI-ProteinID:
XP_004225322
UniProt:
K6UCI7
LinkDB
All DBs
Position
4:complement(93557..94939)
Genome browser
AA seq
342 aa
AA seq
DB search
MFTVPWLFLNNTMDNLPWVEKYRPKKLDDIVHQTNAVSMLKEVVRTKNMPHLIFHGPPGT
GKTSAINALAHELFGRDNISERVLELNASDDRGINVVREKIKAYTRISISKNKINSETNE
TLPPWKLVVLDEADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRF
QGIPINIKKEKLLYICKSEGINILDDALGKIIETTQGDLRRAVSILQLCSCIDPMITLES
VLDVSGLPADDIISKIIDACKMKDLKNVEKAVQDIIEDGYDVAYIFKSLNNYFVMNTEYQ
DSVKSQILLELSRHDYRLHSGATKYIQLMSFASSVHSLLNAA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgttccgtggttattccttaataacacgatggacaacctgccgtgggtggag
aaatacaggccgaagaagctggacgacattgtacaccaaacgaacgcggtgtccatgctg
aaggaggtagtgaggacgaagaacatgcctcatttaatcttccatggtccccccggcaca
gggaaaacctcggccatcaacgctttagctcatgaattatttggcagagataacataagc
gaacgtgtgctggagttaaacgcgtcagatgacagagggataaacgtggtgagagaaaaa
ataaaagcgtacacaagaataagtataagtaaaaacaaaatcaacagcgagactaatgaa
accctgccaccatggaagttagtcgttttggatgaagcagacatgatgacagaagatgca
cagtcagcattgagaagaataatcgaaatttattccaatgtaacgaggtttatattgata
tgtaattatattcacaaaatttcagaccctatatatagtaggtgttcctgttaccgattt
caaggtattccaattaatataaaaaaggagaagttactttatatatgcaaaagtgaaggg
attaacatcttggatgatgctttgggtaaaattattgagacaacacaaggggatttgaga
agagcagtgtccattttgcaattatgttcatgtattgatcccatgataacacttgaatct
gtgttggacgtgtctggtttgccagcggatgatattatttcgaaaattatcgatgcgtgc
aaaatgaaggacttaaagaatgtggagaaggctgtgcaggacatcattgaggatgggtat
gacgttgcgtacatttttaaatcacttaacaattattttgttatgaatacagagtaccag
gactccgtgaagagccagattttgttggagctgtcgcgccacgactaccgcctgcacagc
ggggccacgaagtatatccagctgatgagcttcgcttcgtctgtgcattcgttgttgaac
gcggcgtag
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