KEGG   Plasmodium cynomolgi: PCYB_041230
Entry
PCYB_041230       CDS       T02490                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03030  DNA replication
pcy03410  Base excision repair
pcy03420  Nucleotide excision repair
pcy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCYB_041230
   03410 Base excision repair
    PCYB_041230
   03420 Nucleotide excision repair
    PCYB_041230
   03430 Mismatch repair
    PCYB_041230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcy03032]
    PCYB_041230
   03036 Chromosome and associated proteins [BR:pcy03036]
    PCYB_041230
   03400 DNA repair and recombination proteins [BR:pcy03400]
    PCYB_041230
DNA replication proteins [BR:pcy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PCYB_041230
  DNA Replication Termination Factors
   ELG1-RFC complex
    PCYB_041230
Chromosome and associated proteins [BR:pcy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PCYB_041230
DNA repair and recombination proteins [BR:pcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PCYB_041230
  Check point factors
   HRAD17(Rad24)-RFC complex
    PCYB_041230
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_30 AAA_22 RuvB_N AAA_19 SLFN-g3_helicase AAA_14 AAA_16 nSTAND3 AAA_11 DEAD AAA_23 DUF2247 AAA_28 KTI12 RNA_helicase FtsK_SpoIIIE AAA_5 PIF1 bpMoxR AAA_18 AAA_7 AAA_assoc_2 Viral_helicase1 AAA_2 HTH_44 ResIII MeaB AAA_24 DUF815 Mg_chelatase SNF2-rel_dom RsgA_GTPase ABC_tran DUF1949 VapE-like_dom AAA_33 NPHP3_N
Other DBs
NCBI-GeneID: 14695759
NCBI-ProteinID: XP_004225322
UniProt: K6UCI7
LinkDB
Position
4:complement(93557..94939)
AA seq 342 aa
MFTVPWLFLNNTMDNLPWVEKYRPKKLDDIVHQTNAVSMLKEVVRTKNMPHLIFHGPPGT
GKTSAINALAHELFGRDNISERVLELNASDDRGINVVREKIKAYTRISISKNKINSETNE
TLPPWKLVVLDEADMMTEDAQSALRRIIEIYSNVTRFILICNYIHKISDPIYSRCSCYRF
QGIPINIKKEKLLYICKSEGINILDDALGKIIETTQGDLRRAVSILQLCSCIDPMITLES
VLDVSGLPADDIISKIIDACKMKDLKNVEKAVQDIIEDGYDVAYIFKSLNNYFVMNTEYQ
DSVKSQILLELSRHDYRLHSGATKYIQLMSFASSVHSLLNAA
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgttcaccgttccgtggttattccttaataacacgatggacaacctgccgtgggtggag
aaatacaggccgaagaagctggacgacattgtacaccaaacgaacgcggtgtccatgctg
aaggaggtagtgaggacgaagaacatgcctcatttaatcttccatggtccccccggcaca
gggaaaacctcggccatcaacgctttagctcatgaattatttggcagagataacataagc
gaacgtgtgctggagttaaacgcgtcagatgacagagggataaacgtggtgagagaaaaa
ataaaagcgtacacaagaataagtataagtaaaaacaaaatcaacagcgagactaatgaa
accctgccaccatggaagttagtcgttttggatgaagcagacatgatgacagaagatgca
cagtcagcattgagaagaataatcgaaatttattccaatgtaacgaggtttatattgata
tgtaattatattcacaaaatttcagaccctatatatagtaggtgttcctgttaccgattt
caaggtattccaattaatataaaaaaggagaagttactttatatatgcaaaagtgaaggg
attaacatcttggatgatgctttgggtaaaattattgagacaacacaaggggatttgaga
agagcagtgtccattttgcaattatgttcatgtattgatcccatgataacacttgaatct
gtgttggacgtgtctggtttgccagcggatgatattatttcgaaaattatcgatgcgtgc
aaaatgaaggacttaaagaatgtggagaaggctgtgcaggacatcattgaggatgggtat
gacgttgcgtacatttttaaatcacttaacaattattttgttatgaatacagagtaccag
gactccgtgaagagccagattttgttggagctgtcgcgccacgactaccgcctgcacagc
ggggccacgaagtatatccagctgatgagcttcgcttcgtctgtgcattcgttgttgaac
gcggcgtag

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