Plasmodium cynomolgi: PCYB_041430
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Entry
PCYB_041430 CDS
T02490
Name
(RefSeq) helicase
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PCYB_041430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcy03021
]
PCYB_041430
03036 Chromosome and associated proteins [BR:
pcy03036
]
PCYB_041430
Transcription machinery [BR:
pcy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
PCYB_041430
Chromosome and associated proteins [BR:
pcy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
PCYB_041430
Chromatin remodeling factors
BAF complex
PCYB_041430
PBAF complex
PCYB_041430
GBAF(ncBAF) complex
PCYB_041430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
HSA
Collagen
Motif
Other DBs
NCBI-GeneID:
14695779
NCBI-ProteinID:
XP_004225342
UniProt:
K6UCJ1
LinkDB
All DBs
Position
4:complement(170743..175950)
Genome browser
AA seq
1294 aa
AA seq
DB search
MEKLDEDSTQRTNVAESGKNPICGGEKGASFSLCELNKEGMDLDSLNEHVTGVSIFEKQD
NMSEGEETPTLVVHPDGDTFELTSPLPLHISDKESTGKNERNEPEEEVDNEDYLYVSEHL
RIKKDKQIFVSNALNDYINEYLNLFGSCDEKFFRNENGEAERFMEIGLNLNGGCCGGRAP
HRNGASSDSSSCFSNSSSEGDPAHNSPCTSDEDILEKLHFDKQSLRTMKKLEKSKNAYFK
YLSDLCVKYDLMSRFTLPYFERVKRAIVKTPSRYKRITERCDASLETMQVFLENEENARR
IEQSQKRLRSDVVNSMFGFHIISDTHPMKVPIKGVNRLGGGETRPDTTTSGITTSGITRS
GITTSTCNPFVYKSLQSTKRVGTTKLSGNVSHGEEGSKRRRRQGMTKANSQKNRTHVGGS
SMRESSVGTKNYLNEYIKKVQRNSKLHNKVGTIKQYILLSNWNELRRHHHTVRVVSDQRR
SNAKLLAKECYEQMKLIEKKRKIIIEREEKERLRLLKENDMDAYINLLKNTKNKRLQELL
DVTEEFLTSMSSCVLCQKKDSVFDVASQDEPSSIGSNEMDSTYHSKSTNIAMKSNYKDAR
EKYLLVSHSVREKVVQPSILIGGTLMKYQLEGLEWLISLYNNNLHGILADEMGLGKTIQT
ISLFAYLKEFKWGGISAGKSALSTGGPRQPKNLIIVPLSTLPNWMSEFEAWCPSLKVITY
RGTKCERKGLAKRMLESEYDICLTTFDFAIKEKALLIKIFWTYIVVDEGHRMKNSKSRFH
TILKDFKSKQRVLLTGTPLQNNLSELWSLLNFLLPKIFSSCDDFERWFIRPLHSDKDIQD
VIITEEEQLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNVYIDLSLYQKMLYRQIEM
KGFTQINRNGSISNKSCQNMVMQLRKVVNHPYLFLEEYDMDDYLIKCSGKFEVLDRMLPK
LLKFRHKILIFSQMTKLMDILCDYLDYRGHRFHRLDGNIGLHERRKIIEEFNRVAVGEAS
GADGVDGVDNVDGVDGVDGVDGADGVDGVDGADGVTCGAVSKAGVDHTGEAADGVDGVTC
GAVSKAGVDHTGEAADGNCDEGDPLDEPNGGHDETMIFMLSTRSGSLGLNLQTADTVIIF
DSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSGVEELIFQKAQDKLAINDKVIQAGLF
NKIYSDEDRKNKLKNIFQRSQKGQVTVQSTNPLLLNYYMERSEVELKYFLKFDQRYFGSE
FYTHLQTLNREKPHVPQFTYMSEDEGEGEGDGKR
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattagatgaggattcgacgcaacgtacaaacgtggctgaatcggggaaaaac
ccaatttgtggaggtgagaaaggagcttccttctccctctgtgagctaaacaaggaaggg
atggatctagatagcttaaacgaacatgttacaggagtttccatttttgagaaacaggat
aacatgagcgaaggtgaagaaactcccacgttagtagttcacccagatggtgacacattc
gaattgacttcacctctccctctgcacataagtgataaagaatcaacaggaaaaaatgaa
cgaaacgaacctgaggaagaggtggacaatgaagactacctctacgtaagcgaacatctt
cggataaaaaaagacaaacagatttttgtgagtaacgctctgaatgattacataaacgaa
tacctgaacttgttcggttcatgcgatgaaaaattttttaggaacgaaaatggagaggca
gagcggtttatggaaattggattaaatctgaatggaggctgctgcgggggaagggccccc
caccgcaacggcgcctcatccgacagcagcagctgcttctccaactcgtcttcggaaggg
gaccccgcccacaacagcccctgcacgtcggacgaggacatacttgagaagctgcatttc
gacaagcagtccttacgtacaatgaaaaagctagagaaatccaagaacgcctattttaaa
tacctcagtgatctctgtgtcaagtacgacctaatgagtcgcttcacccttccctacttc
gaacgagtgaaacgagccattgtgaagactccctcgagatataaacgtataacggagagg
tgtgatgcaagcctagagaccatgcaggtttttctagagaatgaagaaaatgcgagaagg
attgaacaaagtcagaagaggttgcgatctgatgtggttaactccatgtttggctttcac
atcatcagtgatactcacccgatgaaggttcccattaagggtgtgaatcggttgggtggg
ggggaaaccaggccagacaccaccacgtcgggaatcaccacgtcgggaatcaccagatcg
ggcatcaccacgtctacttgcaacccatttgtatacaaatctttgcagagcacgaaacgc
gtggggaccaccaaactaagcggcaatgtctcgcatggggaagagggaagcaagcggagg
aggcgacaaggtatgacgaaggccaactctcagaagaataggacccacgtggggggaagc
agcatgagggaaagcagcgtggggacgaagaactacctgaatgaatacataaagaaggtg
caaaggaattccaaactgcataacaaagtagggactatcaagcagtatattttactgtcc
aattggaacgagctgaggagacaccaccacaccgtgagggtggtgtcggaccaacgaagg
agtaacgccaagttgcttgccaaggaatgttacgagcaaatgaagttaatcgagaagaag
cggaaaataattatcgagagggaagaaaaggaacgtttgagattgctcaaggaaaacgac
atggatgcttacatcaatctactaaaaaatacaaaaaacaagaggctgcaggaattgcta
gacgtaactgaggagttcctaactagcatgtcatcatgtgtactgtgccagaagaaggac
agtgtatttgatgtagcatctcaggatgaaccctcatcgatcggttcgaatgaaatggat
tctacctatcattcgaagagcacaaacattgctatgaagtctaattacaaagatgccagg
gagaagtaccttcttgtgtcccactctgttagagagaaagtggtgcagccatcgatcttg
atcggaggaactctgatgaagtaccaattggaggggttagaatggctcatctctctctac
aataacaatttacatggcatcctggcagatgagatgggtctagggaagaccatacaaacg
attagtctatttgcctacctgaaggagtttaaatggggaggaatttccgctgggaaaagt
gcacttagtactgggggcccgagacaaccaaagaatctcatcatagttcctttgtcgaca
ttgccaaactggatgagcgaattcgaagcatggtgtccctctcttaaggtcatcacttac
agaggaaccaaatgtgaaaggaagggattagcaaaacggatgctcgaatctgaatatgac
atatgtctcaccaccttcgattttgctatcaaagaaaaagcattgctaataaaaattttt
tggacctacatagtagtagatgaaggacatagaatgaaaaacagcaaatcgagattccat
acaattttgaaagattttaaaagcaagcagagggtactcttaaccggaacacctctacaa
aataacctctctgagttatggtccctactgaactttctcttgccaaaaattttttcttct
tgtgatgatttcgagaggtggtttataagaccattacatagtgataaagatatacaagac
gtcatcatcacagaagaagaacagctactaattatcaataggttacatagtgtccttctc
ccctttatgctcaggagagtgaaaaaggacgtcttgaaatctctccccaagaaatacgaa
tataacgtttatatagacttatccctataccagaaaatgctttatcgccaaattgaaatg
aagggattcactcaaattaacaggaatggatccattagtaacaagtcgtgtcaaaatatg
gtgatgcaattgaggaaggttgtgaaccatccatatttgtttcttgaagaatacgacatg
gatgattacttaataaagtgtagtggtaaatttgaggtactcgacaggatgctaccaaag
ctgcttaagtttcgtcacaaaattttgattttttcccaaatgacaaagttaatggatatc
ctctgcgactacctggactaccgcggacaccgcttccaccgcctcgacgggaatattggc
ctgcacgagaggaggaagatcatcgaggagttcaaccgggttgccgtgggcgaagcgagc
ggcgcggatggagtggacggagtggataatgtagatggggtggacggagtggatggagtg
gacggcgcggatggagtggacggagtggacggcgcggacggagtgacttgcggcgccgtt
agcaaagcgggtgtagaccatacgggagaagccgcggatggagtggacggagtgacttgc
ggcgccgttagcaaagcgggtgtagaccacacgggagaagccgcggacgggaattgcgat
gagggtgacccgctggacgagccaaacggggggcacgacgaaaccatgattttcatgctg
tccacccgatcggggagtctaggcctgaatctccaaaccgcggacacggtgatcatcttc
gacagcgacttcaacccacaccaagacatacaagccatgtgtaggtgccatcgaattgga
caaaagaacgtcgtgaaggtcttccgattcatcactctctccggggtagaagaactgatt
ttccaaaaggcgcaggataaactagccatcaacgacaaggtcatacaggcaggtctattt
aataagatatacagtgatgaggacagaaagaacaagctgaaaaatattttccaaaggagc
cagaagggacaagtgacggtgcagtccaccaacccactgctactcaactactacatggag
aggtcagaggtggagttgaaatattttctcaaatttgatcagaggtacttcggctcggag
ttctacacgcatctgcagactctcaatcgggagaagccccacgtgccgcagttcacgtat
atgagtgaggacgagggggagggggagggagatgggaagcggtga
DBGET
integrated database retrieval system